Skermanella cutis: IGS68_24790
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Entry
IGS68_24790 CDS
T07020
Name
(GenBank) serine hydroxymethyltransferase
KO
K00600
glycine hydroxymethyltransferase [EC:
2.1.2.1
]
Organism
skt
Skermanella cutis
Pathway
skt00260
Glycine, serine and threonine metabolism
skt00460
Cyanoamino acid metabolism
skt00630
Glyoxylate and dicarboxylate metabolism
skt00670
One carbon pool by folate
skt00680
Methane metabolism
skt01100
Metabolic pathways
skt01110
Biosynthesis of secondary metabolites
skt01120
Microbial metabolism in diverse environments
skt01200
Carbon metabolism
skt01230
Biosynthesis of amino acids
skt01240
Biosynthesis of cofactors
skt04981
Folate transport and metabolism
Module
skt_M00975
Betaine degradation, bacteria, betaine => pyruvate
Brite
KEGG Orthology (KO) [BR:
skt00001
]
09100 Metabolism
09101 Carbohydrate metabolism
00630 Glyoxylate and dicarboxylate metabolism
IGS68_24790
09102 Energy metabolism
00680 Methane metabolism
IGS68_24790
09105 Amino acid metabolism
00260 Glycine, serine and threonine metabolism
IGS68_24790
09106 Metabolism of other amino acids
00460 Cyanoamino acid metabolism
IGS68_24790
09108 Metabolism of cofactors and vitamins
00670 One carbon pool by folate
IGS68_24790
09150 Organismal Systems
09154 Digestive system
04981 Folate transport and metabolism
IGS68_24790
Enzymes [BR:
skt01000
]
2. Transferases
2.1 Transferring one-carbon groups
2.1.2 Hydroxymethyl-, formyl- and related transferases
2.1.2.1 glycine hydroxymethyltransferase
IGS68_24790
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Motif
Pfam:
SHMT
Aminotran_1_2
Beta_elim_lyase
DegT_DnrJ_EryC1
Motif
Other DBs
NCBI-ProteinID:
QQP92610
LinkDB
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Position
complement(5312656..5313969)
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AA seq
437 aa
AA seq
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MSHSIERFFTARLADSDSELASSLARELHRQQDQIELIASENIVSSAVLEAQGSVLTNKY
AEGYPGRRYYGGCEFVDVAEQLAIDRAKALFGCSYANVQPHSGAQANQAVFMALLQPGDT
ILGMSLAAGGHLTHGASVNQSGKWFNAVQYGVRRDDARIDYGQVRDLAREHRPKLIVAGG
SAYPRVIDFAAFRAIADEVGAYLMVDMAHYAGLIAGGVYPNPVPHAHVTTTTTHKTLRGP
RGGMVLSNDADLGKKINSAVFPGLQGGPLMHVIAAKAVSFGEALRPDFRSYARSVVDNAR
ALASRLVEGGVDIVSGGTDSHIVLVDLRPKGLTGKAAEASLERAGMTCNKNGIPFDPEKP
MVTSGVRLGTPAATTRGFGTAEFTQVGEMITQVLDGLAAAGGSGDNAAVEAQVREKVQAL
CARFPIYSGVPLAAAAE
NT seq
1314 nt
NT seq
+upstream
nt +downstream
nt
atgtcgcactccatcgaacggttcttcaccgcccgcctcgccgatagcgattccgaactg
gcgtcctcccttgcccgggaactgcaccggcagcaggaccagatcgagctgatcgcgtcg
gagaacatcgtctcttccgccgtgctggaggcccagggctccgtcctgaccaacaagtac
gcggagggctatcccggccgccgctactacggcggctgcgagttcgtcgacgtcgccgag
cagctcgcgatcgaccgggccaaggcgctgttcggctgctcctatgcgaacgtccagccc
cactcgggcgcgcaggccaaccaggcggtcttcatggcgctgctccagccgggcgacacc
atcctcggcatgtcgctggcggcgggcggacacctgacccacggcgcctcggtcaaccag
tccggcaaatggttcaacgcggtgcagtacggcgtccggcgcgacgacgcgcggatcgac
tacggccaggtccgcgacctcgcgcgcgagcacaggccgaagctgatcgtcgccggcggc
tcggcctatccccgggtgatcgacttcgcggcgttccgcgccatcgccgacgaggtcggg
gcatacctgatggtggacatggcccactatgccggcctgatcgcgggcggcgtctatccc
aatccggttccgcacgcccacgtcaccaccacgacgacgcacaagacgctccggggtccg
cgcggaggcatggtgctgtcgaacgacgctgacctgggcaagaagatcaactccgccgtg
ttcccgggattgcagggcggtccgctgatgcatgtgatcgccgcgaaggcggtgtcgttc
ggcgaggcgcttcggccggacttcaggagctatgcccgctcggtcgtcgacaatgcccgc
gcgctggcctcgcggctggtcgagggcggggtcgatatcgtgtcgggcggaaccgacagc
cacatcgtgctggtcgacctgcggcccaagggcctgaccggcaaggcggctgaagcgagc
ctggagcgcgccgggatgacctgcaacaagaacggcatcccgttcgacccggaaaagccg
atggtgacctccggcgtgcgcctcggcaccccggccgccacgacgcggggcttcggcacg
gcggagttcacccaggtcggcgagatgatcacccaggtgctcgatgggctggccgccgcc
ggcggctccggcgacaacgccgccgtggaagcccaggtccgggaaaaggtgcaggccctg
tgcgcccgcttcccgatttattccggagtgcccttggcggctgccgcggagtga
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