Skermanella cutis: IGS68_25630
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Entry
IGS68_25630 CDS
T07020
Symbol
nifJ
Name
(GenBank) pyruvate:ferredoxin (flavodoxin) oxidoreductase
KO
K03737
pyruvate-ferredoxin/flavodoxin oxidoreductase [EC:
1.2.7.1
1.2.7.-]
Organism
skt
Skermanella cutis
Pathway
skt00010
Glycolysis / Gluconeogenesis
skt00020
Citrate cycle (TCA cycle)
skt00620
Pyruvate metabolism
skt00650
Butanoate metabolism
skt00720
Other carbon fixation pathways
skt01100
Metabolic pathways
skt01110
Biosynthesis of secondary metabolites
skt01120
Microbial metabolism in diverse environments
skt01200
Carbon metabolism
skt01210
2-Oxocarboxylic acid metabolism
Module
skt_M00307
Pyruvate oxidation, pyruvate => acetyl-CoA
Brite
KEGG Orthology (KO) [BR:
skt00001
]
09100 Metabolism
09101 Carbohydrate metabolism
00010 Glycolysis / Gluconeogenesis
IGS68_25630 (nifJ)
00020 Citrate cycle (TCA cycle)
IGS68_25630 (nifJ)
00620 Pyruvate metabolism
IGS68_25630 (nifJ)
00650 Butanoate metabolism
IGS68_25630 (nifJ)
09102 Energy metabolism
00720 Other carbon fixation pathways
IGS68_25630 (nifJ)
Enzymes [BR:
skt01000
]
1. Oxidoreductases
1.2 Acting on the aldehyde or oxo group of donors
1.2.7 With an iron-sulfur protein as acceptor
1.2.7.1 pyruvate synthase
IGS68_25630 (nifJ)
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Gene cluster
GFIT
Motif
Pfam:
POR_N
POR
EKR
PFOR_II
Fer4_7
Fer4_21
Fer4_10
TPP_enzyme_C
Fer4
Fer4_16
Fer4_6
Fer4_8
Fer4_2
Fer4_9
Fer4_17
Transketolase_C
Fer4_18
Fer4_4
Fer4_15
Motif
Other DBs
NCBI-ProteinID:
QQP89328
LinkDB
All DBs
Position
complement(5504687..5508280)
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AA seq
1197 aa
AA seq
DB search
MPDDGSVSIARSSGEGRTQAGEVIDGNQAAASVAYRASEVIAIYPITPASPMGELADEWA
AKGLPNLWGQVPRVVEMQSEGGAAGAIHGALQAGALATSFTASQGLLLMIPNLYKIAGEL
TPFVLHVAARTLATHALSIFGDHSDVMACRQTGFAMLASSSVQEAQDMALVAHAATLESR
IPFIHFFDGFRTSHELNRVAVLEDEQIRALLDGDATDAPRRRALTPDHPVIRGTAQNADV
FFQAREACNPYYEACPGIVRGVLDRFAALTGRRYAPFDYDGAPDAERVVVAMGSGAQTVR
ETALWLAARGHKVGALTVRLYRPFDTAGFLEALPRTVRAVAVLDRTKEPGSVGEPLFLDV
VAALADAPAEFPVRPVVIGGRYGLSSKEFTPGMAAAVFEELAGPQPKRRFTVGITDDVGH
SSLAFDPDFDIEPPDTVRAVFFGLGSDGTVGANKNSLKIIAGHSGAHAQGYFVYDSRKAG
ATTVSHLRFGRQPVRAPWLIRKADFVACHHAPLLERADVLELAAPGAQVLLNLPGTPEEV
WDRLPREVQELAIERGLRLHAIDASRVARDAGLGRRINTIMQTCFFALSEVMPRDEAIAG
IRAAIEKSYGRRSEEMVRRNNAAVDEALAHLVPVPVPSRPTGRPRPPAVPGDAPDFVKRV
TALMLAGHGDRLPVSAFPVDGTWPLGTTRYEKRMIATEIPIWNAELCIQCNKCAMVCPHA
AIRVKAAAPADLADAPEGFAALDYRGDEFQGAKYLLQVAPDDCTGCTLCVEVCPAKDKGN
PRRKALEMRPAETVRPAARPLWDHFRQVPEVPRERVPHNVKQVQLFEPLFEFSGACAGCG
ETPYVKLLTQLFGDRAVIANATGCSSIYGGNLPTTPYAANADGRGPAWANSLFEDNAEFG
FGIRVGIDQLGDQARSLLRALEHELPDGLVQGLLAEGPAGEAALKARREAVAELRRQLSG
IAGLAARRLELLADYLAPKSVWIVGGDGWAYDIGYGGLDHVLSSDRDVNVLVLDTEVYSN
TGGQQSKATPLGASAKFAMAGRAVGKKDLGMLAMAYGHVYVAHVAFGAKDAQTVKAFMEA
ESYPGPSLIIAYSPCVAHGYDLCHQLDQQKLAVDSGHWPLFRYDPRRLAAGQPPLQLDSG
PPKARLADFMANETRFGVVRRDDPERFRRLLKAAETENRLRLDLYRHMAGFVEPAAD
NT seq
3594 nt
NT seq
+upstream
nt +downstream
nt
atgcccgacgacgggtccgtctccatcgcacgcagctccggggagggccggacgcaggcc
ggcgaggtcatcgacggcaaccaggccgcggcctcggtcgcgtaccgggccagcgaggtc
atcgcgatctaccccataacccccgcctcgcccatgggcgagctggccgacgaatgggcg
gccaaggggctgcccaatctgtggggacaggtcccccgggtggtcgagatgcagtcggag
ggcggggccgccggggcgatccacggcgcgctccaggcgggcgcgctggcgaccagcttc
acggcgtcccaaggcctgctgctgatgatccccaacctctataagatcgcgggcgagctg
acgccgttcgtgctccatgtggcggcgcgcaccctggcgacccacgccctgtcgatcttc
ggcgaccattccgacgtcatggcctgccgccagaccggtttcgcgatgctggcatcctcc
tcggtgcaggaggcgcaggacatggcgctggtcgcccatgccgcgaccctggaatcccgc
atccccttcatccatttcttcgacgggttccgcacctcccacgagctgaaccgggtggcg
gtgctggaggacgagcagatccgggccctgctggacggggacgcgaccgacgccccgcgc
cggcgcgcgctgacccccgaccatcccgtgatccgcggcaccgcgcagaacgcggatgtc
ttcttccaggcgcgcgaggcctgcaatccctactacgaggcctgccccggcatcgtccgc
ggcgtcctggaccgcttcgcggcgctgaccggccgccgctacgccccgttcgactatgac
ggcgcgccggacgccgagcgggtcgtcgtcgccatgggatcgggcgcccagacggtgcgg
gaaacggcgctctggctggcggcgcgcggccacaaggtcggcgcgctgaccgtccggctc
taccggcccttcgacaccgccggattcctggaggcactgccgaggacggtccgggcggtc
gcggtgctggaccggaccaaggagccgggctccgtcggcgaacccctgttcctcgacgtg
gtcgcggcgctggcggacgccccggcggagttccccgtccgccccgtcgtgatcggcggg
cgctacgggttgtcatccaaggagttcacgcccggcatggccgcggcggtattcgaggaa
ctggccgggccgcagccgaagcggcgcttcaccgtcggcatcaccgacgacgtgggccat
tcctcgctggcgttcgacccggacttcgacatcgagccgcccgacaccgtgcgggcggtg
ttcttcggcctgggctcggacgggacggtcggggccaacaagaactcgctgaagatcatc
gccgggcacagcggcgcccatgcccaaggctatttcgtctatgacagccgcaaggccggc
gccaccaccgtctcccacctgcgcttcgggcggcagccggtcagggctccctggctgatc
cgcaaggcggatttcgtcgcctgccaccacgcccccctgctggagcgggccgacgtgctg
gagctggccgctccgggcgcccaggtgctgctgaaccttcccggcaccccggaggaggtc
tgggaccggctgccgcgcgaggtccaggaactggccatcgagcgcggtttgcggctccac
gcgatcgacgccagccgggtcgcgcgtgacgcggggctggggcgccgcatcaacaccatc
atgcagacctgcttcttcgccctgtccgaggtgatgccgcgcgacgaggcgatcgccggg
atccgcgccgcgatcgagaagagctacggccgccgtagcgaggagatggtccgccgcaac
aatgccgccgtggacgaggcgcttgcccatctggtgccggtcccggttccgtcccggccc
acgggccgtccccggccgccggcggttcccggcgatgcgccggacttcgtcaagcgggtg
acggcgctgatgctcgccgggcacggcgaccggctgccggtcagcgcctttccggtggac
ggcacttggccgttgggcaccacgcgttacgagaagcgcatgatcgcgaccgagatcccg
atctggaacgccgagctgtgcatccagtgcaacaagtgcgcgatggtctgcccgcacgcc
gcgatccgggtcaaggccgccgcacccgccgacctggcggacgccccggaaggcttcgcg
gcgctcgactatcgcggcgacgagttccagggggcgaagtacctgctccaggtcgctccc
gacgactgcaccggctgcaccctgtgcgtcgaggtctgcccggccaaggacaagggcaat
ccccggcgcaaggcgctggagatgcgccccgccgagacggtccgcccggcggcccggccg
ctctgggaccatttccggcaggtgccggaggtcccgcgcgagcgggtgccccacaacgtc
aagcaggtgcagctgttcgagccgctgttcgagttctccggcgcctgcgccggctgcggc
gagacgccctacgtcaagctgctgacccagctgttcggcgaccgcgccgtcatcgccaac
gccaccggctgctcgtcgatctatggcggcaacctgccgaccacgccctatgcggccaat
gccgacgggcgcgggccggcttgggccaactccctgttcgaggacaatgccgaattcggc
ttcggcatccgggtcgggatcgaccagctcggcgaccaggccaggtcgctgctgcgggct
ctggagcatgagcttccggacggcctcgtgcaggggctgctggcggaagggcccgccggg
gaggcagcgctcaaggcccggcgggaggcggtcgccgagctgcgccggcagctgtccggg
atcgccggcctcgccgcacggcggctggagcttctggccgactatctcgcgcccaagtcg
gtctggatcgtcggcggcgacggctgggcgtacgacatcggctatggcggcctggaccac
gtgctgtcgtccgaccgggacgtgaacgtgctggtgctggacacggaggtctattccaac
accggcggccagcagtccaaggcgacgccgctcggcgcctcggccaagttcgccatggct
ggccgggcggtcggcaagaaggacctgggcatgctggcgatggcctacggccatgtctat
gtcgcccatgtcgcgttcggcgccaaggacgcgcagacggtcaaggccttcatggaggcc
gaatcctatcccggcccgtcgctgatcatcgcctacagcccctgcgtcgcccacgggtac
gacctgtgccaccagctcgaccagcagaagctggcggtcgacagcggacactggccgctg
ttccgctacgatccgcgccggctggcggcgggacagccgccgctccagctggacagtggc
ccgcccaaggcgcggctggccgacttcatggccaacgaaacccgcttcggcgtcgtccgg
cgcgacgaccccgagcggttccggcggctgctcaaggcggcggagaccgagaacaggctg
cgcctggacctctaccgccacatggcggggttcgtcgagccggcggcagactga
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