Skermanella sp. TT6: IGS68_30430
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Entry
IGS68_30430 CDS
T07020
Name
(GenBank) IS1380 family transposase
Organism
skt
Skermanella sp. TT6
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Gene cluster
GFIT
Motif
Pfam:
DDE_Tnp_1_4
DDE_Tnp_1
DDE_Tnp_1_assoc
Toxin_38
Motif
Other DBs
NCBI-ProteinID:
QQP92775
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Position
pTT6-1:complement(564676..566022)
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AA seq
448 aa
AA seq
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MPARVELTPSLPGLSPVAGKPVVARFDGGQLSSDAGVLGLREIEKRLGIADRLAACLEDP
RTPGRVVHGLAEIIRFRLLMIAAGYEDGNDADSLRRDPAFKLALDRLPDGAGLCSQSTIS
RLENLPDARALMRMGRALVDFYCTGFRQVPKRIVLDIDDTFDAVHGEQQLRLFNGHYDEY
GFQPIVVFDEHGRFITAILRPAKRPKGTEIRAHLRRIVRQIRANWPQVEILLRADSHYCC
PEVLNWCRTNCLDYVLGLAPTSTLRRHILDLEASTATRFAAGPATKVRRFKEFYDAAGSW
SRTERIIARVEVGPQGPDTRFIVTSLRHGRGRWLYEKLYCARGQAENHIKSWKTHLCADR
TSCHKATANQFRLFLHAGAYWLLWSIRALMPRRSRWRVAQFDTLRLRLIKLAARIVETRR
QILVHLPTACPEQTILSLLLERVPRLVT
NT seq
1347 nt
NT seq
+upstream
nt +downstream
nt
atgcccgcccgagttgaacttaccccatcgctgcccggcctgtcacctgtcgccggcaaa
cccgtggtcgcccgcttcgatggtgggcagctgtcctccgatgccggcgtgctgggcctg
cgggaaatcgagaagcggctcgggatcgccgaccggcttgcggcgtgcctggaagacccc
cggacgcccgggcgggtcgttcatggactggcggagatcatccgcttccgcctgctcatg
atcgcggccggctacgaggacggcaacgacgccgacagcctgcgccgggatccggcgttc
aagctggcgctcgaccgcctgccggatggtgccggcctgtgctcgcagtccaccatctcg
cgcctggagaacctgcccgatgcccgcgccctgatgcgcatgggccgcgctctggtcgat
ttctactgcaccgggttccggcaggtgccgaagcggatcgtgctggatattgacgacacc
ttcgatgccgttcacggcgagcagcaattgcgcttgttcaatggccattacgacgagtac
ggcttccagccgatcgtcgtgttcgacgagcacgggcgcttcatcaccgccatcctgcgc
ccggccaagcggcctaaaggcaccgagatccgggcgcacctgcgtcggatcgtgcggcag
atccgggccaactggccgcaggtcgagatcctgctgcgcgccgacagccattactgctgc
cccgaggtcctgaactggtgccggaccaactgcctggactatgtgctcggtctcgccccg
accagcacgctgcggcgccatatccttgacctggaggccagcaccgccacccggttcgcc
gccggtcccgcgaccaaggttcggcgcttcaaggaattctatgacgccgccggaagctgg
agtcggaccgagcggatcattgcgcgcgtcgaggtcgggccgcaggggccggacacccgc
ttcatcgtcaccagtctgcgccacggccgagggcggtggctctatgagaaactctattgc
gcccgcggccaggcggaaaatcacataaagagctggaagacgcatctatgcgccgaccgc
acctcctgccacaaggccaccgccaaccagttccggctgttcctgcatgctggagcttac
tggctgctgtggtcgatacgcgccctgatgccgcgccggtcgcgctggcgggtcgcccag
ttcgacacgttgcgtctgcgtttgatcaaactggcggcccggatcgtcgagaccaggcgg
caaatcctcgtccacctgcccaccgcctgcccggagcaaactatcctgagcctgcttctg
gagcgggttcctcggctcgtcacctga
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