Skermanella sp. TT6: IGS68_31505
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Entry
IGS68_31505 CDS
T07020
Name
(GenBank) sigma-54-dependent Fis family transcriptional regulator
KO
K02481
two-component system, NtrC family, response regulator
Organism
skt
Skermanella sp. TT6
Brite
KEGG Orthology (KO) [BR:
skt00001
]
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
02022 Two-component system [BR:
skt02022
]
IGS68_31505
Two-component system [BR:
skt02022
]
NtrC family
Unclassified
IGS68_31505
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Paralog
Gene cluster
GFIT
Motif
Pfam:
Sigma54_activat
Sigma54_activ_2
Response_reg
HTH_8
AAA_5
Mg_chelatase
RWP-RK
HTH_psq
HTH_50
AAA_16
AAA_3
Xre-like-HTH
HTH_29
AAA_22
HTH_17
HTH_30
HTH_23
AAA
HTH_AsnC-type
HTH_Tnp_ISL3
AAA_7
HTH_24
Motif
Other DBs
NCBI-ProteinID:
QQP92961
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Position
pTT6-1:complement(798730..800037)
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AA seq
435 aa
AA seq
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MNDGPSVLVVEDDPVLGPALMQRLRLEGFRPRLAASGTAAVEALAGGAPPHAVVSDIRLP
DMDGEALYRHLLDSVGALPVYFITAHGQVDQAVRLIKAGARDYLTKPVDVDSLVAELRKA
CEPDAAADAAALGAAPAMRQAEAVLRKAARVDIPVLLTGETGVGKEVAARLLHAANRADR
PFAAVNCAAIPRDLVESTLFGHERGAFTGAVASSPGLLARAGTGTLFLDEIAELPAEHQS
KLLRVIQERVFLPVGGREERRFEARLVCATHADLAACVAAGTFREDLYFRINVVEVRIPP
LRERPEDVSLLARRFLDDAVARFGLESRALSPAGLAALADHDWPGNVRELRNRIERAAVL
ADETVIGPADLFPEAGLDGPPVAGTGTLDEALTVATRAKVEEALRRAEGNRGQAARLLGV
SRTTLWKRMRELGIG
NT seq
1308 nt
NT seq
+upstream
nt +downstream
nt
atgaacgacggtccttccgtcctggtggtcgaggacgatccggtgctcggcccggccctg
atgcagcggctccgcctggagggtttcaggccgcggcttgccgcgagcgggaccgccgcg
gtcgaggccctcgccggcggcgccccgccccacgccgtggtcagtgacatccgtctcccc
gacatggacggggaggcgctctaccggcacctgctggactccgtcggggcgctgcccgtg
tacttcatcacggcgcacggccaggtcgaccaggccgtgcgactgataaaggcgggagcg
cgcgactacctgaccaagcccgtcgacgtggactcgctggtcgcggagctgcgcaaggcc
tgcgagccggacgcggcggcggatgcggcggccctgggcgccgccccggccatgcgccag
gccgaggcggtcctgcgcaaggcggcccgggtggacatcccggtactgctgacgggcgag
acaggcgtcggcaaggaggtcgcggcccggctgctccacgccgccaaccgggcggaccgg
ccgttcgccgccgtcaactgcgcggcgatcccgcgcgacttggtggagagcacgctgttc
ggccacgagcgcggcgccttcacgggggcggtggcttccagccccggcctgctggcgcgc
gccggaaccgggacgctcttcctcgacgagatcgccgagctgccggccgagcaccagtcg
aagctgctgcgcgtgatccaggagcgggtcttcctgccggtcggcggccgggaggagcgg
cgcttcgaggcgcgcctggtctgcgccacccatgccgacctggccgcctgcgtcgccgcc
gggacgttccgggaggatctttatttccggatcaacgtggtggaagtccgcatcccgccg
ctccgggaacgacccgaagacgtgtccctgctcgcccgccgcttcctcgacgatgccgtg
gcacggttcggcctggaatcccgcgcgctgtcccccgctgggctggcggccctcgccgac
catgactggccgggcaatgttcgcgagctgcgcaaccgcatcgaacgggcggcggtgctc
gcggacgagacggtgatcgggccggcggatctcttcccggaggcggggttggacgggccg
ccggtcgccgggaccggcaccttggacgaggcgctgaccgtcgcgacccgggcgaaggtg
gaggaggcgctccggcgcgccgagggaaaccgcggccaggcggcgaggctgctcggcgtc
tcgcgcacgaccctgtggaagcgcatgcgcgagctggggatcggctga
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