Skermanella cutis: IGS68_32200
Help
Entry
IGS68_32200 CDS
T07020
Name
(GenBank) peptidase domain-containing ABC transporter
KO
K11004
ATP-binding cassette, subfamily B, bacterial HlyB/CyaB
Organism
skt
Skermanella cutis
Pathway
skt02010
ABC transporters
skt03070
Bacterial secretion system
Brite
KEGG Orthology (KO) [BR:
skt00001
]
09130 Environmental Information Processing
09131 Membrane transport
02010 ABC transporters
IGS68_32200
03070 Bacterial secretion system
IGS68_32200
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
02000 Transporters [BR:
skt02000
]
IGS68_32200
02044 Secretion system [BR:
skt02044
]
IGS68_32200
Transporters [BR:
skt02000
]
ABC transporters, eukaryotic type
ABCB (MDR/TAP) subfamily
ABCB-BAC subgroup
IGS68_32200
Secretion system [BR:
skt02044
]
Type I secretion system
alpha-Hemolysin/cyclolysin transporter
IGS68_32200
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
ABC_membrane
ABC_tran
cNMP_binding
Peptidase_C39
SMC_N
AAA
LPG_synthase_TM
AAA_29
AAA_7
RsgA_GTPase
AAA_22
Mg_chelatase
Motif
Other DBs
NCBI-ProteinID:
QQP93677
LinkDB
All DBs
Position
pTT6-2:complement(154238..157447)
Genome browser
AA seq
1069 aa
AA seq
DB search
MDTIETVRNTAALEAIRSVLQTHVLFNVLPAAEKRAIELLLEVRQVPAGKRLFTQGAAAD
GMYVIHDGTARLKENTGSKLVSVGLIEPGATIGQTSLLEETKWPHHVIAETPLTLVCLRA
DRARLLIAESRVVDEHFRRYVGLVEVGERLRALLGNATYSAEEFSDLLSKMGVKLIRAES
AVFTQGDHDPRLYFIESGAVELIRAPITGDPISLSRCGRGTLIGETGALPRRSPKGAASG
IQTYTARALTDVTVLVIYQQTVERILSLNPELRQRLSERARDIEQIEADEIAARRRAEGV
DLRIKLAEGMSEDEFRAAKAKEAAKLAVIRQNTQADSAAACLAMVMGHYGRKFTLGQMQE
VTGLNTPETNPDEIIRGAETLGFRAKGYALTYADLKGLKLPAIVGWQGYHWIVLVKAGDR
EVEVADPAKGLSRIKRDEFIASWTAADVAGVLDRRPDAGVLIALEPTVKFEKEEDAKSSI
RHFINYIMPYKKYYGEAILAAVVINILGLASPLFVQTIVDNVVVHHDVGLLNMMLGGMVL
VAVLTTAMSVVQSLLLAHTTSRLDMRLMSEFYRHVLSLPMDFFLTKNKGEILARFGENQK
IRAILTGSTITVLMNTLMIVLYFLMMFAYSVPLSVIVVIFIPIYIGIVVYFTPKIKAIAQ
EIFITNSQSQSYLIESLNGIEALKATSNEYFARARWENAFVENVNRSFRQQKLSLMSNSL
FKLATLASSIAVLWIGATQVMSGDMSIGELMGFNMLMGLVTGPVTQMVNLWNELQEVRIA
IDRVGDVLNVKSEHVTVSAPDKIQTQVRNLEGEIKFEQVNFSYNTNDQKRSVMHGFDLTI
HPGEHVAFVGPSGCGKSTIAKMVLGFYKPASGDLTIDGKDIRTMDLNSLRRNIGVVLQDT
FIFGGTVAENIALGDPEPDMQAVQEAAKLAGSEDFIINFPLGYQTRIGEKGMGLSGGQRQ
RIGIARALYRRPKIMIFDEATSALDNESEARITQELKGVLVNRTSITIAHRLTTVMDSDR
ICFIKDGKVQEQGTHAQLTDPEFLKENGYAGLYYQLARTQFDLPALDLK
NT seq
3210 nt
NT seq
+upstream
nt +downstream
nt
atggacacgatcgagaccgtcaggaacaccgcagcactcgaagcgatccgctccgtgctc
cagacccatgtcctgttcaacgtgctgcccgccgccgagaagcgcgcgatcgaactgctg
ctggaggtgcgccaggtcccggccggcaagcgcctgttcacccagggggccgccgccgac
ggcatgtacgtgatccacgacggcaccgcgcgcctgaaggagaacacgggatccaagctg
gtcagcgtcggcctgatcgagccgggcgccaccatcggccagacctccctgctggaggag
acgaagtggccgcaccacgtcatcgccgagacgccgctgaccctggtctgcctgcgcgcc
gaccgcgcccgcctgctgatcgcggaaagccgcgtcgtggacgagcatttccgccgctat
gtcggcctggtggaggtcggcgaaaggctccgcgccctgctcggcaacgccacgtactcg
gcggaggaattctccgacctgctgtcgaagatgggcgtcaagctgatccgggcggagtcg
gcggtcttcacccagggcgaccacgacccgcgcctctatttcatcgagagcggcgccgtc
gagctgatccgcgcgccgatcaccggcgacccgatctccctgtcgcgctgcggccggggc
accctgatcggcgagaccggcgccctgccccgccgctcgcccaagggggccgccagcggc
atccagacctataccgccagggcgctgaccgacgtgaccgtgctggtgatctaccagcag
acggtcgagcgcatcctgtcgctcaatcccgagcttcgccagcgcctgtccgagcgcgcc
cgcgacatcgagcagatcgaggccgacgagatcgcggcgcgcaggcgggcggagggcgtg
gacctccggatcaagctcgccgagggcatgtcggaggacgagttccgcgccgccaaggcg
aaggaggccgccaagctcgcggtgatccgccagaacacccaggccgacagcgccgccgcc
tgcctcgccatggtgatgggccattacggccgcaagttcaccctcggccagatgcaggag
gtcaccggcctcaatacgccggagaccaacccggacgagatcatccgcggcgccgagacg
cttggcttccgcgccaagggctacgccctgacctatgccgacctgaaggggctgaagctg
cccgccatcgtgggctggcagggctatcactggatcgtgctggtcaaggccggcgaccgg
gaggtggaggtcgccgaccccgccaagggcctgtccaggatcaagcgggacgagttcatc
gcctcctggacggcggccgacgtcgccggcgtgctcgaccgccggcccgacgccggcgtg
ctgatcgcgctggaaccgacggtgaagttcgagaaggaggaggacgccaagtcctccatc
cgccacttcatcaactacatcatgccgtacaagaaatattacggcgaggcgatcctggcg
gcggtcgtgatcaacatcctgggcctggcctcgccgctgttcgtccagaccatcgtggac
aacgtcgtggtccaccacgatgtcgggctgctcaacatgatgctgggcggcatggtgctg
gtcgccgtcctgaccaccgccatgtcggtggtccagagcctgctgctggcccacaccacg
tcccggctcgacatgcggctgatgtcggagttctaccggcacgtgctcagcctgccgatg
gatttcttcctgaccaagaacaagggcgagatcctggcccggttcggcgagaaccagaag
atccgcgccatcctgaccggctcgacaatcaccgtgctgatgaacacgctgatgatcgtg
ctctatttcctgatgatgttcgcctactcggtgccgctcagcgtgatcgtggtgatcttc
atcccgatctatatcggcatcgtcgtgtatttcacgcccaagatcaaagccatcgcgcag
gagatcttcatcaccaactcccagtcccaatcctacctgatcgagagcctgaacgggatc
gaggcgctgaaggcgaccagcaacgaatatttcgcccgcgcccggtgggagaacgccttc
gtcgagaacgtcaaccgcagcttccgccagcagaagctcagcctgatgtccaacagcctg
ttcaagctcgccacgctggcgtccagcatcgccgtgctctggatcggcgccacccaggtg
atgagcggcgacatgagcatcggcgagctgatgggcttcaacatgctgatggggctggtc
accgggccggtcacccagatggtcaacctgtggaacgagctccaggaggtccgcatcgcg
atcgaccgcgtcggcgacgtgctgaacgtcaagtcggaacacgtgaccgtctccgccccc
gacaagatccagacccaggtccgcaacctggaaggcgagatcaagttcgagcaggtcaat
ttcagctacaacaccaacgaccagaagcggtcggtcatgcacggcttcgacctgaccatc
catccgggggagcatgtcgccttcgtcggcccgtccggctgcggcaagagcacgatcgcc
aagatggtgctgggcttctacaagccggcgtcgggcgacctgacgatcgacggcaaggac
ataaggacgatggatctcaattcgctgcgccggaacatcggcgtggtgctccaggacacc
ttcatcttcggcggcaccgtggccgagaacatcgcgctgggcgacccggagccggacatg
caggcggtgcaggaggcggccaagctggcggggtcggaggacttcatcatcaatttcccg
ctgggctaccagacccgcatcggcgagaagggcatgggcctgtcgggcggccagcgccag
cgcatcggcatcgcccgcgccctgtaccgccggcccaagatcatgatcttcgacgaggcg
accagcgcgctcgacaacgagtccgaggcccgcatcacccaggagctgaagggcgtcctg
gtcaaccgcacctcgatcaccatcgcccaccggctgaccaccgtcatggacagcgaccgc
atctgcttcatcaaggacggcaaggtccaggaacagggcacccacgcccagctcaccgat
cccgaattcctcaaggagaacggctacgccggcctctactaccaactcgcccgcacccag
ttcgacctgcccgcgctcgacctgaaatga
DBGET
integrated database retrieval system
