Skermanella cutis: IGS68_33350
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Entry
IGS68_33350 CDS
T07020
Symbol
fdhF
Name
(GenBank) formate dehydrogenase subunit alpha
KO
K00123
formate dehydrogenase major subunit [EC:
1.17.1.9
]
Organism
skt
Skermanella cutis
Pathway
skt00630
Glyoxylate and dicarboxylate metabolism
skt00680
Methane metabolism
skt01100
Metabolic pathways
skt01120
Microbial metabolism in diverse environments
skt01200
Carbon metabolism
Brite
KEGG Orthology (KO) [BR:
skt00001
]
09100 Metabolism
09101 Carbohydrate metabolism
00630 Glyoxylate and dicarboxylate metabolism
IGS68_33350 (fdhF)
09102 Energy metabolism
00680 Methane metabolism
IGS68_33350 (fdhF)
Enzymes [BR:
skt01000
]
1. Oxidoreductases
1.17 Acting on CH or CH2 groups
1.17.1 With NAD+ or NADP+ as acceptor
1.17.1.9 formate dehydrogenase
IGS68_33350 (fdhF)
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Paralog
Gene cluster
GFIT
Motif
Pfam:
Molybdopterin
Molydop_binding
Fer2_4
Molybdop_Fe4S4
Fer4_7
Fer4_8
Fer4_9
Fer2
Fer4_21
Fer4_Nqo3
Fer4
Fer4_10
Fer4_17
Fer4_16
Fer4_4
Fer4_6
Fer4_2
PC4
Fer4_18
Motif
Other DBs
NCBI-ProteinID:
QQP93509
UniProt:
A0ABX7BGL5
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All DBs
Position
pTT6-2:complement(413508..416282)
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AA seq
924 aa
AA seq
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MTEAIRFFLDGEEVEARPGETIWQVANRRGTEIPHLCYSPAPGYRPDGNCRACMVEVEGE
RVLAASCIRKPQNGMKVNTASESAKSARKLVFELLVGDQPDRKEAHDPDAKFWQWADKLD
VTDSRFPGADAAPEKDFSHPAMAVQLDACIQCNLCVRACREVQVNDVIGMAMRGHAEKIV
FDFDDPMGSSTCVACGECVQACPTGALMPATQVDLHTGVFAAAPDRKVDSVCPYCGVGCQ
LTYNIKDDKILSVTGRDGPSNQNRLCVKGRFGFDYVHHEDRLTVPLIRREGVSKHDVDID
PENPLTHFRRASWEEALEVAAKGLARIRDERGGDALAGFGSAKGSNEEAYLFQKLVRTGF
GTNNVDHCTRLCHASSVTALIEGIGSGAVTAPFMAAQDAEVIVVIGANPTENHPVAATFF
KNAVERGAKLVVMDPRGQALKRFSTHMLQFKPGRDVAMLNALLNVIVTENLYDQQYVQAN
TQDFEELKEHVKDYTPERMEEICGISADELRTVARLYARSEASIIFWGMGVSQHTHGTDN
VRCLISMALTTGQIGRPGTGLHPLRGQNNVQGASDAGLIPMVFPDYQSVETPKIREFYED
LWGSKLPGKRGLTVVEIMDAIHDGKISGMYIMGENPAMSDPDVGHAREALAKLDHLVVQD
IFLTETAKYADVVLPASAWPEKDGTATNTNRQVQMGRKALPLPGEARQDWEIVAQLANRL
GLNWTYTHPRDVFAEMTKAMPSLANITWERLEREHSVTYPCDAPDQPGHEIVFGNGFPTE
TGRGRLVPAAIIPPAEEPDAEYPMVLTTGRQLEHWHTGAMTRRAQVLDDLEPEAVAYMAP
ADLRRLGLNGGDRMRVATRRGHVELVARADYAVPTGLIFMPFCYAEAAANVLTNPQLDPF
GKIPEFKYCAARVEPLREAAQAAE
NT seq
2775 nt
NT seq
+upstream
nt +downstream
nt
atgaccgaggcgatccgatttttcctcgacggcgaagaggtcgaggcccgtcccggcgag
accatctggcaggtcgccaaccgtcgcggcaccgagatcccccacctctgctattccccg
gcccccggctaccggcccgacggcaactgccgcgcctgcatggtcgaggtcgagggagag
cgcgtcctggccgcgagctgcatccgcaagccgcagaacggcatgaaggtcaacaccgcg
agcgagagcgccaagtcggcccgcaagctggtgttcgagctgctggtcggcgaccagccc
gaccggaaggaggcgcacgaccccgacgccaagttctggcagtgggccgacaagctggac
gtgaccgacagccgcttccccggcgccgacgcggcacccgagaaggacttcagccatccc
gccatggcggtccagctcgacgcctgcatccagtgcaacctgtgcgtccgcgcctgccgc
gaggtccaggtcaacgacgtgatcggcatggcgatgcgcggccacgccgagaagatcgtc
ttcgacttcgacgatcccatgggaagcagcacctgcgtcgcctgcggcgagtgcgtccag
gcctgcccgaccggcgcgctgatgccggccacccaggtggacttgcacaccggcgtcttc
gccgcggcgcccgaccgcaaggtggacagcgtctgcccctattgcggcgtcggctgccag
ctgacctacaacatcaaggacgacaagatcctgtcggtgaccggccgcgacggcccgtcc
aaccagaacaggctgtgcgtcaagggccgcttcggcttcgactatgtccaccacgaggac
cggctgaccgtcccgctgatccgccgcgagggcgtgtccaagcatgacgtggacatcgac
cccgagaacccgctgacccatttccgccgcgccagctgggaagaggcgctggaggtggcg
gccaagggcctggcgaggatccgcgacgagcggggcggcgacgcgctggccggcttcggc
tccgccaagggctcgaacgaggaggcctacctgttccagaagctggtccgcaccggcttc
ggcaccaacaacgtcgaccactgcacccggctgtgccacgcctcctcggtgacggcgctg
atcgagggcatcggctccggcgcggtgacggcccccttcatggcggcccaggacgccgag
gtgatcgtggtgatcggcgccaacccgaccgagaaccacccggtcgccgcgaccttcttc
aagaacgcggtggagcggggcgccaagctggtggtgatggacccgcgcggccaggcgctg
aagcgcttctccacccacatgctccagttcaagccgggccgcgacgtggcgatgctgaac
gccctgctcaacgtcatcgtcacggagaacctgtacgaccagcaatatgtccaggccaac
acccaggacttcgaggagctgaaggagcacgtcaaggactacacgcccgagcggatggag
gagatctgcggcatctccgccgacgagctgcgcacggtggcgcgcctctacgcccggtcc
gaggcctcgatcatcttctggggcatgggcgtgtcccagcacacccacggcaccgacaac
gtgcgctgcctgatctcgatggcgctgaccaccggccagatcggccgccccggcaccggc
ctgcatccgctgcgcggccagaacaacgtgcagggcgcgtccgacgccggcctgatcccc
atggtcttccccgactaccagtcggtggaaaccccaaagatccgcgagttctacgaggat
ctgtggggcagcaagctgccgggcaagcgcggcctgaccgtggtcgagatcatggacgcg
atccatgacggcaagatcagcggcatgtacatcatgggcgagaacccggccatgtccgac
ccggacgtgggccacgcccgcgaggcgctggcgaagctcgaccatctcgtggtccaggac
atcttcctgaccgagacggccaagtacgccgacgtggtccttccggcctccgcctggccg
gagaaggacggcaccgcgaccaacaccaaccgccaagtgcagatgggccgcaaggctctg
ccgctgccgggcgaggcccgccaggactgggagatcgtcgcccagctcgccaaccggctg
gggctcaactggacctacacccatccgcgcgatgtcttcgccgagatgaccaaggccatg
ccgtcgctggcgaacatcacgtgggagcggctggagcgcgagcattccgtgacatacccg
tgcgacgcgccggaccagccgggccacgagatcgtgttcggcaacggtttcccgaccgag
acgggccgcggccggctggtgccggcggcgatcatcccgccggccgaggagcccgacgcc
gagtacccgatggttctgaccaccggccgccagctggagcactggcacaccggcgcgatg
acccgccgggcgcaggtgctggacgacctggagccggaagccgtcgcctacatggccccc
gccgacctgcgccggctgggcctgaacggcggcgaccggatgcgcgtcgccacccggcgc
ggccatgtggagctggtggcgcgggccgactatgcggtgccgaccggcctgatcttcatg
ccgttctgctacgccgaggctgccgccaacgtgctgaccaacccgcagctcgaccccttc
ggcaagatcccggagttcaagtactgcgcggcccgggtcgaaccgctgcgggaagccgcc
caggcggcggagtag
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