Skermanella cutis: IGS68_33360
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Entry
IGS68_33360 CDS
T07020
Symbol
sucD
Name
(GenBank) succinate--CoA ligase subunit alpha
KO
K01902
succinyl-CoA synthetase alpha subunit [EC:
6.2.1.5
]
Organism
skt
Skermanella cutis
Pathway
skt00020
Citrate cycle (TCA cycle)
skt00640
Propanoate metabolism
skt00660
C5-Branched dibasic acid metabolism
skt00720
Other carbon fixation pathways
skt01100
Metabolic pathways
skt01110
Biosynthesis of secondary metabolites
skt01120
Microbial metabolism in diverse environments
skt01200
Carbon metabolism
Module
skt_M00009
Citrate cycle (TCA cycle, Krebs cycle)
skt_M00011
Citrate cycle, second carbon oxidation, 2-oxoglutarate => oxaloacetate
Brite
KEGG Orthology (KO) [BR:
skt00001
]
09100 Metabolism
09101 Carbohydrate metabolism
00020 Citrate cycle (TCA cycle)
IGS68_33360 (sucD)
00640 Propanoate metabolism
IGS68_33360 (sucD)
00660 C5-Branched dibasic acid metabolism
IGS68_33360 (sucD)
09102 Energy metabolism
00720 Other carbon fixation pathways
IGS68_33360 (sucD)
Enzymes [BR:
skt01000
]
6. Ligases
6.2 Forming carbon-sulfur bonds
6.2.1 Acid-thiol ligases
6.2.1.5 succinate---CoA ligase (ADP-forming)
IGS68_33360 (sucD)
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Gene cluster
GFIT
Motif
Pfam:
CoA_binding
Ligase_CoA
Succ_CoA_lig
CoA_binding_2
Motif
Other DBs
NCBI-ProteinID:
QQP93511
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All DBs
Position
pTT6-2:complement(418040..418915)
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AA seq
291 aa
AA seq
DB search
MSVLVNSETRVICQGFTGAQGTFHSEQAIAYGTRMVGGVTPGKGGTKHLDLPVFDTVADA
VKDTGANASVIYVPPPFAADAILEAIDAEIALVVCITEGIPVLDMVKVKRALAGSATRLI
GPNCPGIITPDECKIGIMPGHIHRRGKIGIVSRSGTLTYEAVAQTTAAGLGQTTCIGIGG
DPVNGTNFVDSLDLFLKDDETEGIIMIGEIGGDAEVKGAEFVKASGTSKPVVGFIAGRTA
PPGRRMGHAGAVISGGNDTADFKVQALTAAGIHVADSPASLGRTMLQAMGR
NT seq
876 nt
NT seq
+upstream
nt +downstream
nt
atgtcggttctcgtcaattccgaaacgcgggtcatctgccagggcttcaccggcgcgcag
gggaccttccactccgagcaggcgatcgcctacggcacccggatggtcggcggcgtgacc
cccggcaagggcggcaccaagcacctggacctgcccgtcttcgacacggtcgccgacgcg
gtcaaggacaccggcgccaacgccagcgtgatctacgtcccgccgcccttcgcggccgac
gcgatcctggaggcgatcgacgccgagatcgcgctggtcgtctgcatcaccgagggcatc
cccgtcctcgacatggtcaaggtgaagcgggcgctggccggctccgcgacccggctgatc
ggccccaactgccccgggatcatcacgccggacgagtgcaagatcggcatcatgccgggc
catatccaccgccgcggcaagatcggcatcgtttcccgctcgggaacgcttacatatgag
gcggtggcgcagacgaccgcggccggcctcggccagaccacctgcatcggcatcggcggc
gacccggtgaacggcaccaacttcgtggacagcctcgacctgttcctgaaggacgacgag
accgagggcatcatcatgatcggcgagatcggcggcgacgccgaggtcaagggcgccgag
ttcgtcaaggccagcggcactagcaagccggtcgtcggcttcatcgccggccgcacggca
ccgccgggccgccggatgggccacgccggcgccgtgatctcgggcggcaacgacaccgcc
gacttcaaggtgcaggcgctgacggcggccggcatccacgtcgcggacagcccggcgagc
ctggggcgcaccatgctccaggcgatgggacgctga
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