KEGG   Skermanella cutis: IGS68_34220
Entry
IGS68_34220       CDS       T07020                                 
Name
(GenBank) VirB4 family type IV secretion/conjugal transfer ATPase
  KO
K20530  type IV secretion system protein TrbE [EC:7.4.2.8]
Organism
skt  Skermanella cutis
Pathway
skt02024  Quorum sensing
Brite
KEGG Orthology (KO) [BR:skt00001]
 09140 Cellular Processes
  09145 Cellular community - prokaryotes
   02024 Quorum sensing
    IGS68_34220
 09180 Brite Hierarchies
  09183 Protein families: signaling and cellular processes
   02044 Secretion system [BR:skt02044]
    IGS68_34220
Enzymes [BR:skt01000]
 7. Translocases
  7.4  Catalysing the translocation of amino acids and peptides
   7.4.2  Linked to the hydrolysis of a nucleoside triphosphate
    7.4.2.8  protein-secreting ATPase
     IGS68_34220
Secretion system [BR:skt02044]
 Type IV secretion system
  Trb secretion system protein
   IGS68_34220
SSDB
Motif
Pfam: CagE_TrbE_VirB P-loop_TraG AAA_10 AAA_22 AAA_29 AAA_16 ABC_tran AAA_23 DEAD DUF87 ATPase_2 FtsK_SpoIIIE ATG17_like AAA nSTAND3 NACHT T2SSE Zeta_toxin TrwB_AAD_bind CNOT1_TTP_bind
Other DBs
NCBI-ProteinID: QQP93785
LinkDB
Position
pTT6-3:complement(126217..128652)
AA seq 811 aa
MVALKRFRHSGPSFSDLLPYAALIDNGTLLLKDGSLMAGWYFAGPDNESSTDFERNEVSR
QINAILARLGSGWMIQVEAVRVPATAYPARDNCHFPDKVSALIDEERRKRFEAADGHYES
QHAIILTYREPEKRKSGLVKYVYSDDESRATTFADRALDHFRRSIREFEQYMGNVVSIRR
MVTQETEERGGTRTAKYDDLLQFARFCIVGENHPVRLPDIPMYLDFVVTAEFHHGLSPLV
DNRYLAVVAIDGFPAESWPGILNSLDLMPLTYRWSSRFVFLDPIEARQRLERTRKKWLQK
VRPFMDQLFQTNSGAIDQDAALMVAETEDAIAEANSQLVAYGYYTPVIIMFDDDEARLRE
KTEGVRRLIQAEGFAARIETLNVTEAFLGSLPGNWYANIREPLINTRNLADLVPLNSVWS
GSPVAPCPFYPDGSPPLMQVASGSSPFRLNLHSGDVGHTLIFGPTGSGKSTLLALIAAQF
RRYRQAQLFAFDKGKSMYPLTVAVGGDHYDVGAGEALTFCPLSQLDDDGDKAWAAGWLET
LVELQGVKVTPDHRNAIARQIALMAASTRRSLSDFVSGVQMREIKDALRHYTVDGPMGHL
LDAEEDGLTLSDFQTFEIEELMNLGDRNLVPVLLYLFRRIEKRLTGAPSLIILDEAWLML
GHPAFREKIREWLKVLRKANCAVVLATQSISDAEKSGIIDVLKESCPTKICLPNGAARES
GTREFYERIGFNERQIEIVATALPKREYYVASPDGRRLFDMALGPITLSFVGASGKDDIK
RIDELRVHHGDEWPVHWLKQRGIENAEALLA
NT seq 2436 nt   +upstreamnt  +downstreamnt
atggttgcactcaagcgatttcgtcattccggcccgtccttctccgacctgctgccctat
gcggccctgatcgataacggcacgctcttgctcaaggacgggagcctgatggccggctgg
tatttcgccggtccggataacgaaagctcgaccgatttcgagcgcaacgaggtcagccgc
cagatcaatgccattctcgcccggctcggatcgggctggatgatccaggtcgaggccgtg
cgcgtgccggcgacggcctatccggcccgggacaactgccatttccccgacaaggtaagt
gcgctgatcgatgaggaacggcgcaagcgttttgaggcggcggacgggcactatgagagc
cagcacgccatcatcctgacctatcgcgaaccggagaagcgcaagtccggcctcgtcaaa
tatgtctattccgacgatgagtcccgcgcgaccacctttgccgatcgcgcgctcgatcac
ttccggcgttcgatccgcgagttcgagcaatatatgggaaacgtcgtctcgatccgccgc
atggttacacaggagaccgaggaacgcggcggaacccgtaccgccaaatatgacgatctg
ctgcagttcgcccgcttctgcattgtcggcgaaaaccatccggtccgcctgcccgacatt
ccgatgtatctcgatttcgtcgtcacggccgaattccatcacggtctctcgccgctggtc
gacaaccgctatctggcggtcgtggcgatagacggctttccggccgagagctggccaggg
attctcaattctctggacctgatgccgctcacctatcgctggtcgagccgcttcgtcttt
ctcgatccgatcgaggcccgccaaaggctcgagcgcacgcgcaagaagtggctgcagaag
gtccggccattcatggaccagcttttccagaccaattcgggggcgatcgatcaggacgct
gcgctgatggtggcggagacggaagacgccattgccgaggcaaattcgcagcttgtcgcc
tatggctactatacgccggtcattatcatgttcgacgacgacgaggcgcgccttcgcgaa
aagaccgaaggcgtgcgccggctgatccaggccgaaggctttgccgctcgcatcgaaacg
ctgaacgtcaccgaggcgttccttgggagtctgcccggcaactggtacgccaacatccgc
gaaccgctgatcaatacccgcaaccttgccgatctggtgccgctcaactcggtctggtcg
ggctcaccggttgcgccgtgcccgttctatcccgacggctcgccgccgctgatgcaggtc
gcaagcggatcatcgccgttccgcctgaacctccattccggcgacgtgggtcataccctg
atcttcggtccgaccggatcgggcaagtcgacccttctggcgctgatcgcggcacagttt
cgccgttaccggcaagcacagctcttcgctttcgacaagggcaagtcgatgtacccgctg
acggtggctgttggcggcgatcactacgatgttggagcaggggaggcgctgaccttctgc
ccgctttcccaactggacgacgatggcgacaaggcctgggcggccggatggctggaaacc
cttgtcgagctgcagggtgtgaaagtcacccccgatcatcgcaacgcgatcgccagacag
atcgcgctcatggccgcctcgacgcgccggtcgctctccgatttcgtgtcgggtgtgcag
atgcgggagatcaaggacgcgctgcgtcattacacagtcgacggtcccatggggcatctg
ctcgatgccgaggaggatggcctgaccctctcggatttccagacgttcgagatcgaggaa
ttgatgaacctcggcgaccgcaatctcgtgccggtcctgctctacctgttccgtcgcatc
gaaaagcgcctgaccggcgcccccagcctcatcatcctcgatgaggcctggctgatgctc
ggccatccagcgttccgcgagaagatccgcgaatggctgaaggtgctgcgcaaggccaat
tgcgccgtcgttctggcaacgcagtcgatttctgacgcggaaaagtccggcatcatcgac
gtgctcaaggaaagctgcccgaccaagatttgcctgcccaatggcgcggcacgcgaaagc
ggcacacgcgagttctatgagcgtattggcttcaatgagcggcaaatcgagatcgtcgca
accgctcttccgaagcgcgaatactacgtcgcttcgcctgacgggcggcgtctgttcgac
atggccctcgggccaatcaccctgtctttcgtcggcgcgtccggaaaggacgacatcaag
cgcatcgatgagctgcgcgtccaccacggcgacgaatggcccgtccactggctcaagcaa
agaggtatcgaaaatgccgaagctcttcttgcctag

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