Skermanella sp. TT6: IGS68_34995
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Entry
IGS68_34995 CDS
T07020
Name
(GenBank) cache domain-containing protein
KO
K03406
methyl-accepting chemotaxis protein
Organism
skt
Skermanella sp. TT6
Pathway
skt02020
Two-component system
skt02030
Bacterial chemotaxis
Brite
KEGG Orthology (KO) [BR:
skt00001
]
09130 Environmental Information Processing
09132 Signal transduction
02020 Two-component system
IGS68_34995
09140 Cellular Processes
09142 Cell motility
02030 Bacterial chemotaxis
IGS68_34995
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
02035 Bacterial motility proteins [BR:
skt02035
]
IGS68_34995
Bacterial motility proteins [BR:
skt02035
]
Flagellar system
Chemotaxis proteins
MCPs
IGS68_34995
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
dCache_2
sCache_2
MCPsignal
Cache_3-Cache_2
HAMP
Motif
Other DBs
NCBI-ProteinID:
QQP93987
LinkDB
All DBs
Position
pTT6-4:complement(62938..64623)
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AA seq
561 aa
AA seq
DB search
MSYLQRLSIAHRLYLLIAVALLGVVGFALAELAQIRSELTRASHARLRSLGETALAVAAH
YHALSIAGTLPEAEAKAAAAAAVGAMRYSGSEYFWINDITPVMVMHPTRPELNGKNLSEL
KDPTGKRLFVEFVDTARRQGSGIVEYQWPKPGSDTPVGKASFVARFAPWDWVIGTGVYTD
DLAVQFRTEAIRMLSIAAVVVALIAAIALLIGRGVRPLGAMTAAMRRLAEGDTAITIPAQ
GQRDEIGAMAAAVAVFRDNALSRARLEAEQAAGQAVRERRTAAMEELIRTFDRTVGGVLG
GVASAASELGGTAESMASLAEQTNRQAALSAATAEQTSANVQTVAAATEEMAASSQEIGR
QVGRSTGIAEQATLEAQAATASVRGLADATGRISEVVGLIQSIASQTNLLALNATIEAAR
AGEAGKGFAVVASEVKALANQTSRATEEIAAQIAAVQGATTSTVGAIEGIGGTIGTINEI
SSAIAAAVEEQNATTGEIARSVGQAAQGTGEISAGVLEVNDAATRTGEAATRVLGASRAL
SGQAEALRREVETFLSAIRSA
NT seq
1686 nt
NT seq
+upstream
nt +downstream
nt
atgtcctatctccagcgcctgtcgattgcccaccgcctgtacctgctgatcgccgtcgcc
ctgctcggcgtggtcggcttcgcgctcgccgagctggcgcagatccgctcggaactgacg
cgcgccagccatgcccggctgcgcagcttgggcgaaaccgccctggcggtcgccgcccac
taccacgcgctcagcatcgcgggaaccctgcccgaggccgaggccaaggccgccgccgcc
gctgccgtcggcgcgatgcgctacagcggttccgaatacttctggatcaacgacataacg
ccggtcatggtgatgcacccgacccggccggagctcaacggcaagaacctgtcggagctg
aaggaccccaccggcaagcggctgttcgtcgagttcgtcgacaccgcgcggcgccagggc
agcggcatcgtcgagtaccagtggcccaagccgggcagcgacacgccggtcgggaaagcc
tcgttcgtggcccgcttcgcgccctgggactgggtgatcggcaccggcgtctataccgac
gacctggcggtccagttccgcaccgaggcgatccggatgctgtcgatcgcggctgtcgtg
gtggcgctgatcgctgccatcgccctgctgatcggccgcggtgtccgccccctgggcgcg
atgacggcggcgatgcgccggttggccgagggcgacaccgccatcacgatcccggcccag
gggcagcgagacgagatcggcgccatggccgccgccgtcgcggtgttccgggacaatgcg
ctgtcgcgcgcccggctcgaggcggaacaggccgccggccaggcggtacgggaacggcgc
accgccgccatggaggagttgatccggaccttcgaccgtaccgtgggcggcgtgcttggc
ggcgtcgcctcggccgcttcggaactcggcggcaccgccgagagtatggcctcgctcgcc
gaacagaccaaccggcaggcagcactgtcggccgcgacggccgaacagacttcggccaat
gtccagaccgtggcggcggcgaccgaggagatggcggcctcgagccaggagatcggccgt
caggtcggccgctccaccggcatcgccgagcaggcgacgctggaggcccaggcggccacc
gcatcggtgcgcggtctggcggatgccaccgggcggatcagcgaggtggtcgggctgatc
cagtcgatcgccagccagaccaacctgctggcgctcaacgccacgatcgaggcggcgcgc
gccggtgaggccggcaagggtttcgcggtcgtggcttccgaggtcaaggcgctggccaac
cagaccagccgggcaaccgaggagatcgccgcccagatcgccgccgtccagggcgccacc
acgagcacggtgggcgccatcgagggcatcggcggcacgatcggcacgatcaacgagatt
tcctcggcgatcgccgccgcggtcgaggagcagaacgcgaccaccggtgagatcgcccgc
agcgtcggccaggcggcgcaaggcaccggcgagatcagcgccggcgtcctggaggtcaat
gacgccgcgacccgcaccggtgaggcggcgacccgggtgctgggcgcctcgcgggcgctg
tccggccaggccgaggcgctgcggcgcgaggtcgagactttcctgtccgccatccggagc
gcctga
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