Sulfuricurvum kujiense: Sulku_0113
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Entry
Sulku_0113 CDS
T01370
Name
(GenBank) RNA-metabolising metallo-beta-lactamase
KO
K12574
ribonuclease J [EC:3.1.-.-]
Organism
sku
Sulfuricurvum kujiense
Pathway
sku03018
RNA degradation
Brite
KEGG Orthology (KO) [BR:
sku00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
03018 RNA degradation
Sulku_0113
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
sku03019
]
Sulku_0113
Messenger RNA biogenesis [BR:
sku03019
]
Prokaryotic type
Bacterial mRNA degradation factors
RNA degradosome components
Ribonucreases
Sulku_0113
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RNase_J_b_CASP
Lactamase_B
RNase_J_C
Anti-Pycsar_Apyc1
RMMBL
Lactamase_B_2
MupG_C
Lactamase_B_6
Motif
Other DBs
NCBI-ProteinID:
ADR32781
UniProt:
E4TWV0
LinkDB
All DBs
Position
complement(108348..110432)
Genome browser
AA seq
694 aa
AA seq
DB search
MSEEQPGSQTQPQGENRQRRNNRRPFRSRNNNRPEGAEGNTTERPNTEPREDSRPPRQDN
RPPRQDNRPPRQDNRPPRTDRPEGSDANATDAEPARSGRDRGRGGRRGSPSTPIDNNLRD
FVVKNQDAHKNRLNPHYKLDLNNNDKVRITPLGGLGEIGGNITVIETENEAIIIDIGMSF
PDEEMHGVDILVPDFTYLREIRKKIVAVIITHAHEDHIGGVPYFFKEMQFPIYGTPLPLA
MIGNKFDEHHMRDFRRYFNPIVKRIPYKIGNDFEIEWMHMTHSIIDSSSLAITTKAGTII
HTGDFKIDHTPVDGYTADLHRLAHYGEKGVLCLLSDSTNSYNKEWTPSELTVAPGFDRIF
SKAEGRVIMSTFSSNIHRVYQAILTGIKYNRKVCVIGRSMERNLEVCMQYDYIKLPKNIF
IDAEEANRMSDKDVLIVTTGSQGEPSSALFRMAIGEHRHIKIKPTDLIVLSARAIPGNEG
SISGMLNYLQRAGARVANDRDIHVSGHASMEEQKLMLRLTNPKFFLPVHGEYNHIMKHKE
TAVTCGVPERNILLMSDGDSIEVNTKMMRKAKTVKTGKTYIDNQNNHQIEDDIIIDRQKM
ASEGMVMLVAQVSAAESRLLSKPLVTSFGIVADRHDKAFALEMEDVLEHFLINLKPGLIE
NPKALENDLRQVVRKHIYRKMKKYPLIVPHVFVM
NT seq
2085 nt
NT seq
+upstream
nt +downstream
nt
atgtccgaagaacaaccaggatcacaaacacagccgcaaggcgaaaatcgtcaacgccga
aataaccgtcgaccgtttcgcagccgaaacaacaaccgccccgaaggtgcagaggggaat
acgactgagcgtccaaacacagagccgcgggaagacagccgccctcctcgtcaggataac
cgccctccccgccaggacaaccgccctcctcgtcaggacaacagacctcctcgtacagac
cgtccggaaggatccgatgcaaacgcaaccgatgccgaacctgcgcgctcaggccgtgat
cgtggacgcggcggccgtcgcggaagtcctagcacaccgattgataacaatcttcgcgat
tttgttgtcaaaaaccaagatgcccataaaaaccgtctcaatccccactataaactcgat
cttaataataatgacaaagttcgtatcacaccgctgggcggtctcggtgagatcggcgga
aatatcacggtcatcgaaacggaaaacgaagcgattatcattgatatcgggatgagcttt
ccggacgaagagatgcacggagtcgatattctcgtccctgacttcacctacttgcgcgaa
atccgcaaaaaaatcgttgccgtcatcattacccatgcccatgaagaccatatcggaggg
gtaccgtatttcttcaaagagatgcaattcccgatttacggaacgccgttgcctctggca
atgatcggaaacaaattcgacgaacatcatatgcgcgatttccgccgctacttcaatccg
attgttaaacggataccgtacaaaatcggaaacgatttcgaaatcgaatggatgcacatg
acccactcgatcattgactcttcctcattggcgatcacgactaaagcgggaactattatc
catacgggcgattttaaaatcgaccatactccggtagacggctacacggctgacttgcac
cgattggctcactacggtgaaaaaggggttctttgtctcctctcagactccactaactct
tataacaaagagtggactccgagcgaactgaccgtagcaccgggatttgaccgtatcttc
tcgaaagccgaagggcgtgtcatcatgtcaacgttcagttcaaacattcaccgtgtatat
caagcgattttgaccggtataaaatacaaccgtaaagtatgtgttatcggacgatcaatg
gagcggaatctcgaagtatgtatgcaatacgattacattaaacttcctaaaaacatcttc
atcgatgccgaagaggcaaaccgcatgagcgacaaagacgtcctcatcgtcacaaccgga
agtcagggggaaccgagttcggccctcttccgtatggcgatcggcgagcaccgccatatc
aagatcaagccgaccgatttgatcgtcctctccgcacgtgcgattccggggaatgaagga
tcgatttcagggatgctcaactatctccaacgagcaggcgctcgtgtagccaatgacaga
gatatccacgtttcgggacacgcgagtatggaagaacaaaagttgatgcttcgtcttacc
aatcctaaattcttcctccctgttcacggtgaatacaatcacattatgaagcataaagag
acggcggttacctgtggagttccggaacgtaatattctcctaatgtctgacggtgacagt
atcgaagtgaacaccaaaatgatgcgcaaagccaaaaccgtcaaaacaggtaaaacgtac
atcgataaccaaaataatcaccaaatcgaagacgacatcattatcgatcgtcaaaaaatg
gcgagcgaggggatggttatgctggtcgctcaggtcagtgccgcagaatcgcgacttctg
tccaaacctcttgttaccagctttggtatcgtagccgatcgccatgacaaagcgtttgca
ctagagatggaagatgtgttagagcacttcttgatcaatctcaaaccggggctaatcgag
aatccgaaagcgttggaaaacgatcttcgtcaggtagtacgcaaacatatctaccgcaaa
atgaaaaaatatccgcttatcgttccgcacgttttcgtgatgtaa
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