Sulfuricurvum kujiense: Sulku_0982
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Entry
Sulku_0982 CDS
T01370
Name
(GenBank) RNA polymerase, sigma 70 subunit, RpoD
KO
K03086
RNA polymerase primary sigma factor
Organism
sku
Sulfuricurvum kujiense
Pathway
sku02040
Flagellar assembly
Brite
KEGG Orthology (KO) [BR:
sku00001
]
09140 Cellular Processes
09142 Cell motility
02040 Flagellar assembly
Sulku_0982
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
sku03021
]
Sulku_0982
Transcription machinery [BR:
sku03021
]
Prokaryotic type
Bacterial type
RNA polymerase
Sigma factors
Sulku_0982
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Sigma70_r3
Sigma70_r2
Sigma70_r4
Sigma70_r1_2
Sigma70_r4_2
Sigma70_ner
YOMG_N
HTH_36
Motif
Other DBs
NCBI-ProteinID:
ADR33646
UniProt:
E4U2R1
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All DBs
Position
complement(989233..991095)
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AA seq
620 aa
AA seq
DB search
MSVKDLNKHLETLFSEHKSKNCLTYETIVDPFDKQPTLAQAKNILKLAQKHKICLFTSSE
HAKMLNQQEAAAKRAAQLKYIEEASGDEFDILKQHELLEWSRSDSPVRMYLREMGQIPLL
TKEEEVEISKRMEMGEGIIIDAICSVPYLIDFILDYKDPLINRERRVKELFKSFEEENED
DSEDDSDDEGDDDESTEKAPSVKDKKRVEKVVTSFKALEKAKKEWVKATEKMLEERSIDE
MDAEYVLFFLNVSFKKKMLKEALLDLGPTSKLINELVRSMETALRSDEGFDRELKRLEYK
LPLFNDQLKKNHTLILNKICDLTKEEIATKVPEATMVSTYMEIKKLIQTKEASKGGFNME
PEKLADILEQIKRGKNISEVSKTRMAKSNLRLVVSIAKRYTNRGLPFLDLIQEGNIGLMK
AVDKFEYQKGYKFSTYATWWIRQAISRAIADQARTIRIPIHMIETINRINKIMRKHLQEH
GKEPDVETIAEEVGLSVEKVKNVIKITKEPISLEAPIGNEEDGRFGDFIEDKMSLSPSDA
ILKDDLKVQIESVLEQLNEREKAVIKMRFGIMDDESDRTLEEIGKELNVTRERVRQIESS
AIKKLKHPKVGRKLKNYIED
NT seq
1863 nt
NT seq
+upstream
nt +downstream
nt
atgagtgtcaaagatctaaataaacatctcgaaaccctattttccgaacataaatctaaa
aattgtctcacgtatgaaacaattgtcgatccttttgacaaacagcctacccttgcacaa
gcaaaaaacatccttaaattggcacagaaacataaaatttgcctatttacttcttctgaa
catgccaaaatgctcaatcagcaagaagccgccgctaagcgtgccgcacaactgaaatac
atcgaagaagccagcggagacgagttcgacattcttaagcagcatgaattgctcgagtgg
tcgcgttctgattctcccgtacgtatgtatcttcgcgaaatgggtcagatccctcttctc
accaaagaagaagaagttgagatttccaaacggatggagatgggggaagggattatcatc
gatgcgatctgctcggttccctatctgatcgatttcatccttgactataaagatccgctg
atcaatcgcgaacgccgtgtcaaagaacttttcaaaagctttgaagaagagaacgaagat
gacagtgaagatgatagcgatgacgagggcgatgatgatgaatcaaccgaaaaagccccg
tcggtaaaagataaaaaacgggtagaaaaagtcgtaacttcttttaaagcgcttgaaaaa
gcgaaaaaagagtgggtaaaagcgacagaaaaaatgttggaagaacgctctatcgatgag
atggatgcggagtacgtactattcttcctcaatgtcagcttcaagaaaaaaatgctgaaa
gaggcattgctcgacctcggaccgacctctaaactgatcaacgaacttgtccgctccatg
gaaacggcattgcgcagtgacgaagggtttgaccgtgagttgaaacgtttggaatacaag
cttccgctattcaacgatcagcttaaaaagaatcacacattgattctcaataaaatctgc
gatttgaccaaagaagagatcgcgacgaaagttcccgaagcgacgatggtcagcacctat
atggagatcaaaaaactgatccagaccaaagaggcgtccaaagggggcttcaatatggag
ccggaaaaactggccgacattttggagcagatcaaacggggtaaaaatatctctgaagtc
tctaaaacccgtatggcaaaatcgaatctccgtctcgttgtctcgattgcgaagcgttat
accaaccgcggtctccctttcctcgatttgattcaggaaggaaatatcggcttaatgaaa
gcggtcgataaattcgagtaccaaaaagggtacaaattttcgacctatgcgacatggtgg
attcgtcaggcaatcagccgtgcgattgccgatcaggcacgtaccatccgtatcccgatc
catatgatcgaaacaatcaaccgtatcaacaaaatcatgcgtaaacacctccaagagcac
ggaaaagagccggatgtcgaaaccatcgcagaagaagtggggctttcagttgaaaaagtc
aaaaacgtcatcaaaatcaccaaagagccgatctctctcgaagctcctatcggtaacgaa
gaagacggacgtttcggagatttcatcgaagataaaatgtctctctctccgagcgatgcc
attttgaaagacgatttgaaggttcaaatcgaaagtgttctcgagcagcttaatgaacgt
gaaaaagcggttattaaaatgcgtttcggaatcatggatgacgagagtgaccgcacactc
gaagagatcggtaaagagcttaacgttacccgtgaacgtgttcgccaaatcgaaagcagt
gcgatcaaaaaactgaaacacccgaaagtgggtcgtaaacttaaaaactacatcgaggac
tga
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