Sulfuricurvum kujiense: Sulku_1620
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Entry
Sulku_1620 CDS
T01370
Name
(GenBank) DEAD/DEAH box helicase domain protein
KO
K11927
ATP-dependent RNA helicase RhlE [EC:
5.6.2.7
]
Organism
sku
Sulfuricurvum kujiense
Pathway
sku03018
RNA degradation
Brite
KEGG Orthology (KO) [BR:
sku00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
03018 RNA degradation
Sulku_1620
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
sku03019
]
Sulku_1620
Enzymes [BR:
sku01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.7 DEAD-box RNA helicase
Sulku_1620
Messenger RNA biogenesis [BR:
sku03019
]
Prokaryotic type
Bacterial mRNA degradation factors
RNA degradosome components
Helicases
Sulku_1620
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DEAD
Helicase_C
ResIII
Cas3-like_C_2
P-loop_SecA
Motif
Other DBs
NCBI-ProteinID:
ADR34281
UniProt:
E4U095
LinkDB
All DBs
Position
complement(1627638..1628933)
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AA seq
431 aa
AA seq
DB search
MTFTDLQLNDSLLKAINDQGYTTPTPVQAQAIPFILEGRDMLAGAQTGTGKTAGFTLPLL
QILSDRKQPKTHRKIRALILTPTRELAAQVGESVKLYGKYLPLKSAVIFGGVGINPQITM
LRNGVDILIATPGRLLDHVGQGTVDLSGVEIFVLDEADRMLDMGFIRDIRRVITILPKVR
QNLLFSATYSDDIKTLANTLLRNPAEVEVARRNTSSELVKQSVILVDCKRKSSLLGELIG
KHKWEQVLVFTRTKHGANKLTEYLQKIGITAAAIHGNKSQSARTKALDDFKRSSVRVLVA
TDIAARGIDIDALPHVVNFELPNIAEDYVHRIGRTGRAGCEGEALSLVCVDEADYLRGIE
KLINKKLDARIIEGYEPDPSIKAEPIQRGRGGSGGGGGGNRGGNSGGGAKPAQKRDGGRH
EPKHRTNERRR
NT seq
1296 nt
NT seq
+upstream
nt +downstream
nt
atgacatttaccgatttacaattaaacgactcgttgcttaaagcaattaatgatcaaggc
tacacaacgccgacccctgtacaggcacaggcaatcccttttattttagaagggcgtgat
atgctcgcaggtgcacaaacgggaaccggcaaaactgccggatttacacttccgcttctt
caaatactcagtgatcgaaaacagcctaaaacccatcgaaagattcgtgctcttatcctc
acgccgacacgcgaactggcggcacaggtaggggagagcgtgaagctttacggaaagtat
cttccccttaaaagtgccgttattttcggcggtgtcgggatcaatccccaaattacgatg
ttacgcaacggagtcgatatccttatcgcgactcccggacgtttgctggatcatgtgggg
caggggacggttgatctgagcggagtcgaaatttttgttctggacgaagccgaccggatg
ctcgatatggggttcatccgcgatattcgccgtgtcatcaccattttgccgaaagtacga
caaaatcttttattttccgcaacctattcggacgatatcaaaacattggcaaatacgctg
cttcgcaaccctgccgaggttgaagtggcacgccgcaacacttccagcgaattggtgaaa
caaagcgttatccttgtcgattgcaaacgtaaaagctctcttttgggcgaattgatcggc
aagcataaatgggaacaggttcttgtctttacccgcaccaagcacggggcgaacaaactg
accgaatatctccaaaaaatcggtattaccgccgctgccatccacggcaataaaagtcag
tctgcccgtaccaaagcgctggatgattttaaacgaagcagtgtcagagtgttggttgcg
accgatatcgccgcacggggtattgatattgacgctttgccgcacgttgtgaactttgag
cttcccaatattgcggaggattatgtccaccgcatcgggagaacaggccgtgccggatgt
gagggggaagccctatctttggtatgtgtcgatgaagccgattatctacgagggattgaa
aagctgatcaataaaaagcttgacgcgcgcattatcgaagggtacgaacccgatccctct
atcaaagccgaaccgattcaacgcggtcgcggcggttccggaggcggaggcggtggaaac
cgcggaggaaacagcggcggtggagccaaaccggcacaaaaacgtgatggcggacggcat
gaaccgaaacaccgcactaatgagcgtcgacgataa
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