Sphaerospermopsis kisseleviana: NIES73_08800
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Entry
NIES73_08800 CDS
T10228
Name
(GenBank) polyribonucleotide nucleotidyltransferase
KO
K00962
polyribonucleotide nucleotidyltransferase [EC:
2.7.7.8
]
Organism
skv Sphaerospermopsis kisseleviana
Pathway
skv03018
RNA degradation
Brite
KEGG Orthology (KO) [BR:
skv00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
03018 RNA degradation
NIES73_08800
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
skv03019
]
NIES73_08800
03016 Transfer RNA biogenesis [BR:
skv03016
]
NIES73_08800
Enzymes [BR:
skv01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.7 Nucleotidyltransferases
2.7.7.8 polyribonucleotide nucleotidyltransferase
NIES73_08800
Messenger RNA biogenesis [BR:
skv03019
]
Prokaryotic type
Bacterial mRNA degradation factors
RNA degradosome components
Other RNA degradosome components
NIES73_08800
Transfer RNA biogenesis [BR:
skv03016
]
Prokaryotic type
tRNA degradation factors
NIES73_08800
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RNase_PH
RNase_PH_C
S1
PNPase
KH_1
KH-I_KHDC4-BBP
KH_2
KH_KhpA-B
KH_N4BP1_2nd
KH_SLS1_2
TLN1-like_RS
ANIS5_cation-bd
aRib
DUF1542
Motif
Other DBs
NCBI-ProteinID:
BAZ79635
LinkDB
All DBs
Position
complement(997527..999683)
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AA seq
718 aa
AA seq
DB search
MAEFEKSISFDGRDIRLKVGLLAPQAGGSVLIESGDTAVLVTATRSEAREGVDFLPLTVD
YEERLYAAGRIPGGIMRREGRPPEKAILTSRLIDRPLRPLFPSWLRDDLQIIAFTLSMDE
QVPPDVLAVTGASIATLIAQIPFNGPMAAVRVGLVGDDFIINPTYAEIEAGDLDLVVAGS
PDGVIMVEAGANQLPERDIIEAIDFGYEAVRDLIQAQLDLVEELGLKLVQEEPPEVDQTL
ENYIRDRASAEIKKILAQFELTKNERDTALDAVKDEIKAEIEALPEEDPIRVAATADSKA
LGNTFKDITKYFMRRQIIEDNVRVDGRKLDEVRPISCQVGVLPRRVHGSGLFNRGLTQVL
SACTLGTPGDAQNLNDDLQIDQSKRYLHHYNFPPFSVGETKPMRAPGRREIGHGALAERA
ILPVLPPKEQFPYVIRVVSEVLSSNGSTSMGSVCGSTLALMDAGVPIIKPVTGAAMGLIK
EGDEVRVLTDIQGIEDFLGDMDFKVAGTDTGITALQMDMKISGLSLDVIKQAVEQAKAAR
LHILEKMLQTIDTPRTETSPFAPRLLTIKIDPEMIGLVIGPGGKTIKGITEETGAKIDIE
DNGTVTISAVDEGRAKRAKSIIQGMTRKLNEGDVYIGRVTRIIPIGAFVEFLPGKEGMIH
ISQLADYRVGKVEDEVAVGDEVIVKVREIDNKGRINLTRLGIHPDQAAAAREAAATNR
NT seq
2157 nt
NT seq
+upstream
nt +downstream
nt
atggcagaatttgagaagtcaatatcctttgatggacgggatattcgactgaaggtagga
ctgttagccccccaagcgggtgggtcggtgttgatagaatcgggggatactgctgtttta
gtgacagctacaaggtcagaagccagagaaggcgttgattttcttcccctgacggtagat
tatgaagaaagactgtatgcagcaggaagaatccctggtggtatcatgcgccgtgaaggt
cgtccacctgaaaaagcgattttaactagccgtctgattgaccgtcctttgcgtcctttg
tttccttcatggttacgggatgatttgcaaattattgctttcaccctgtcaatggatgaa
caagtaccgccagatgtgttagctgtaactggcgcttctatcgctactcttattgcccaa
attccttttaatggaccaatggcagcagtgcgggtaggtttagtaggtgatgatttcatt
attaaccccacctatgcggaaattgaagcgggtgatttggatttagtagttgctggttca
cctgatggtgtgatcatggtggaagccggagcaaatcagttaccagagcgagatatcatc
gaggccattgattttggttacgaagcagtgcgggatttaatccaagcacagctagattta
gttgaagaactgggtttaaaactcgtccaagaagagccaccggaagtagatcaaacatta
gaaaactatatccgcgatcgcgccagtgcagaaattaaaaaaatcttggctcaatttgag
ttaaccaaaaacgagcgtgatacagctttagatgcagttaaggatgaaatcaaagcggaa
atagaagccttacccgaagaagatcccattcgtgtagctgctacagccgatagcaaagcc
cttggtaatacctttaaggatatcaccaaatattttatgcgccgtcaaatcattgaagat
aacgtgcgcgttgatggtcgtaaattagatgaagtccgtcctatatcttgccaagtcgga
gttttaccccgtcgtgtacatggcagtgggttatttaaccggggactcactcaagtatta
tctgcttgtaccctgggtacaccaggagatgctcaaaatctcaatgatgatctgcaaata
gatcaatctaaacgctatctgcatcattacaatttcccacccttctccgtcggtgaaacc
aaacccatgcgtgcgccaggaagacgagaaataggtcatggtgctttagccgaaagagcg
attttacccgtactaccgcccaaagaacaattcccctacgtcatccgcgtagtatcagaa
gtgctttcttccaacggttctacctcaatgggttctgtctgtggttctactctcgccctt
atggatgcgggtgtacccattatcaaacctgtcaccggtgcagcaatgggcttgattaaa
gaaggcgacgaagtgcgcgttctcaccgatattcaaggcattgaagacttcttaggggac
atggacttcaaagttgcgggtactgatacaggcatcaccgccttacaaatggatatgaaa
atatccggtttgtccttggacgtgattaaacaagctgttgagcaagctaaagcagcccgg
ttacatattttggagaaaatgctccagaccatcgacacaccacgcaccgaaacctcaccc
tttgccccacgtctattgacgatcaagattgatccagaaatgattggtctggtcattgga
cccggtggtaaaaccatcaaaggaattaccgaagaaactggtgcaaaaatcgacattgaa
gataatggtacagtcaccatttccgcagtcgatgaaggcagagcaaagagagcaaagagc
atcattcaaggcatgactcgtaaactcaatgaaggggatgtttacataggtcgtgtgaca
cggattatacctattggtgcatttgtggaatttttgcccggaaaagaaggcatgattcac
atttctcaacttgctgactatcgtgttggtaaagtggaagatgaagtagccgttggtgat
gaagtgattgtcaaagtgcgcgaaattgacaataaaggtagaattaacctgacacgcttg
ggtatacaccctgatcaagcagctgctgcgcgagaagctgcggctacaaatcgttaa
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