Sphaerospermopsis kisseleviana: NIES73_11620
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Entry
NIES73_11620 CDS
T10228
Name
(GenBank) DNA-directed RNA polymerase subunit gamma
KO
K03046
DNA-directed RNA polymerase subunit beta' [EC:
2.7.7.6
]
Organism
skv Sphaerospermopsis kisseleviana
Pathway
skv03020
RNA polymerase
Brite
KEGG Orthology (KO) [BR:
skv00001
]
09120 Genetic Information Processing
09121 Transcription
03020 RNA polymerase
NIES73_11620
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
skv03021
]
NIES73_11620
03400 DNA repair and recombination proteins [BR:
skv03400
]
NIES73_11620
Enzymes [BR:
skv01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.7 Nucleotidyltransferases
2.7.7.6 DNA-directed RNA polymerase
NIES73_11620
Transcription machinery [BR:
skv03021
]
Prokaryotic type
Bacterial type
RNA polymerase
Core subunits
NIES73_11620
DNA repair and recombination proteins [BR:
skv03400
]
Prokaryotic type
SSBR (single strand breaks repair)
NER (nucleotide excision repair)
TCR (transcription coupled repair) factors
DNA-directed RNA polymerase complex (RNAP)
NIES73_11620
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RNA_pol_Rpb1_1
RNA_pol_Rpb1_2
RNA_pol_Rpb1_3
Cas9-BH
Motif
Other DBs
NCBI-ProteinID:
BAZ79915
LinkDB
All DBs
Position
complement(1280338..1282215)
Genome browser
AA seq
625 aa
AA seq
DB search
MRSIQSNQFDYVKIGIASPERIRIWGERTLPNGQVVGEVTKPETINYRTLKPEMDGLFCE
RIFGPAKDWECHCGKYKRVRHRGIVCERCGVEVTESRVRRHRMGFIKLAAPVAHVWYLKG
IPSYIAILLDMPLRDVEQIVYFNSYVVLAPGNADTLAYKQLLTEDQWLEIEDAIYSEDSQ
LVGVEVGIGAEALLRLLADINLEQEAENLREEINNAKGQKRAKLIKRLRVIDNFIATGSK
PEWMVMSAIPVIPPDLRPMVQLDGGRFATSDLNDLYRRVINRNNRLARLQEILAPEIIVR
NEKRMLQEAVDALIDNGRRGRTVVGANNRPLKSLSDIIEGKQGRFRQNLLGKRVDYSGRS
VIVVGPKLQIHQCGLPREMAIELFQPFVINRLIRSGMVNNIKAAKKLISRNDPSVWDVLE
EVIEGHPVMLNRAPTLHRLGIQAFEPILVEGRAIQLHPLVCPAFNADFDGDQMAVHVPLS
LESQAEARLLMLASNNILSPATGKPIVTPSQDMVLGAYYLTAENPNATKGKNSFFASLDD
VIMAYQQDQVDLHSYIYVRFDGEMETGQPDHEPQEVVENEDGSRTLLYKFRRVREDAEGN
LISQYIYTTPGRVIYNKAIQEALAS
NT seq
1878 nt
NT seq
+upstream
nt +downstream
nt
atgagatcgattcaatctaatcaatttgactacgtaaaaatcggtatagcttcaccagaa
cgtatccgtatttggggtgaacgcactttacctaatggtcaggtagtgggtgaggtaaca
aaaccagaaaccattaattaccggactctgaagccggaaatggatggtttgttttgtgaa
cgaatttttggaccggctaaggactgggaatgtcattgtggtaaatataaacgggtgcgt
cacagaggaattgtttgtgaacgctgtggtgtggaggtaacagaatcacgggtgcgacgg
catcgcatgggttttattaaactagccgctcctgttgcccatgtgtggtatctcaagggg
attcctagttatatcgccattttgctggatatgccgctgcgggatgtggagcaaattgtt
tatttcaattcttatgtggtgttagctcctggtaatgcagatactctcgcttataaacaa
ttgttgactgaagatcaatggctggaaattgaggatgcaatttatagcgaagattcccaa
ctggtgggggtagaggtaggtattggggctgaggcactgctgcgactattagctgatatt
aatttggaacaggaagcggaaaatctgcgggaagaaattaataacgctaaggggcaaaaa
cgggcgaagttaattaaacgattgcgggtaattgataattttattgctactggttctaag
ccggaatggatggtaatgtcagctattccggtgattccgccggatttgcgcccaatggtg
cagttggatgggggaagatttgctactagtgatttaaatgatttatatcggcgggtgatt
aatcggaataatcgcttggcgaggttacaggaaattctggcaccggagattattgtccgt
aatgaaaaacggatgttgcaagaagcggtagacgcattaattgataatggtcgcaggggg
cggacggtagtaggagcaaataaccgtcctctcaaatctttatcagacattatcgaaggt
aagcaaggacgtttccggcagaatttgttaggtaaacgggtggactattctggacgttct
gtgattgtagtgggtccaaagttgcagattcaccagtgtggactacccagggaaatggct
attgaactgttccagccttttgtgattaatcggttgattcgttcagggatggtgaataat
atcaaggcggcgaaaaagttgatttctcgcaatgaccccagtgtgtgggatgtgttggaa
gaggtgattgaagggcatccggtgatgttaaaccgagcgcctacgttgcacagattaggg
attcaagcttttgaaccaattttagtagaaggtagagctattcaactccatcccttagta
tgtccagcatttaacgccgactttgatggcgaccaaatggcggttcacgtgcctttgtcg
ttggaaagtcaagcagaagcccggttattaatgttggcatccaataacattctttcccca
gcaaccggtaaacctattgtcacccctagccaagatatggtgttaggagcatattacctg
acagcagaaaatcccaacgctactaaaggtaaaaatagtttttttgcttctttggatgat
gtgattatggcgtatcagcaggatcaggtagacctacattcctatatttacgtgcggttt
gatggagagatggaaaccggacagccggatcatgaaccgcaggaggttgtggaaaatgaa
gatggcagccggactttgttgtataagttccgtcgtgtgcgtgaggatgccgaaggaaat
ttaatttctcaatatatttacactactcctggaagggtaatttataacaaagcgattcag
gaagcattagcaagttaa
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