Sphaerospermopsis kisseleviana: NIES73_14180
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Entry
NIES73_14180 CDS
T10228
Name
(GenBank) chaperonin GroEL
KO
K04077
chaperonin GroEL [EC:
5.6.1.7
]
Organism
skv Sphaerospermopsis kisseleviana
Pathway
skv03018
RNA degradation
Brite
KEGG Orthology (KO) [BR:
skv00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
03018 RNA degradation
NIES73_14180
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
skv03019
]
NIES73_14180
03110 Chaperones and folding catalysts [BR:
skv03110
]
NIES73_14180
03029 Mitochondrial biogenesis [BR:
skv03029
]
NIES73_14180
09183 Protein families: signaling and cellular processes
04147 Exosome [BR:
skv04147
]
NIES73_14180
Enzymes [BR:
skv01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.1 Enzymes altering polypeptide conformation or assembly
5.6.1.7 chaperonin ATPase
NIES73_14180
Messenger RNA biogenesis [BR:
skv03019
]
Prokaryotic type
Bacterial mRNA degradation factors
Other RNA degradation factors
Chaperones
NIES73_14180
Chaperones and folding catalysts [BR:
skv03110
]
Heat shock proteins
HSP60 / Chaperonin
NIES73_14180
Mitochondrial biogenesis [BR:
skv03029
]
Mitochondrial protein import machinery
Matrix
Other matrix factors
NIES73_14180
Exosome [BR:
skv04147
]
Exosomal proteins
Exosomal proteins of haemopoietic cells (B-cell, T-cell, DC-cell, reticulocyte, and mast cell)
NIES73_14180
Exosomal proteins of other body fluids (saliva and urine)
NIES73_14180
Exosomal proteins of breast cancer cells
NIES73_14180
Exosomal proteins of colorectal cancer cells
NIES73_14180
Exosomal proteins of bladder cancer cells
NIES73_14180
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Cpn60_TCP1
Pho88
Motif
Other DBs
NCBI-ProteinID:
BAZ80168
LinkDB
All DBs
Position
1579123..1580835
Genome browser
AA seq
570 aa
AA seq
DB search
MEEIEKTNMAKIISFDEESRRSLEKGINALADAVKITLGPKGRNVLLEKKFGIPQIVNDG
ITVAKEIELEDPLENTGARLIQEVASKTKDTAGDGTTTATVLAQALVKEGLKNVAAGTNP
IALKRGIDKTVEALVAEIAKIAKPVEGSAIAQVATVSAGNDEEVGNMLAEAMEKVTKDGV
ITVEESKSLTTELEVVEGMQIDRGYISPYFITNNDRMTVEFENARILIADKKINAIQDLV
PVLEKVARLGQPLLIIAEDIEGDALATLVVNKARGVLAVAAIKSPGFGERRKALLQDIAI
LTDGQMISEEIGLSLDTATLEMLGTARKITIDKENTTIVSGTDNKPEVQKRIAQIRKQLE
ETDSDYDTEKLQERIAKLAGGVAVIKVGAATETELKDRKLRIEDALNATKAAVAEGIVPG
GGTTLIHLSTKVDAIKNSLDAEEKIGADIVQKSLEAPLRQIADNAGAEGSVIVSKVKDTD
INIGYNAATGEFEDLIAAGIIDPAKVVRSALQNAASIAGMVLTTEAIVVEKPEKKAAAPD
AGMGGMGGMGGMGGMGGMGGMGGMGGMGMF
NT seq
1713 nt
NT seq
+upstream
nt +downstream
nt
atggaagagatagagaaaacaaacatggctaagattatttcatttgatgaggaatcacgg
cgatcgctagaaaaaggcattaacgccttggcagatgcggtaaaaatcaccttgggacca
aaaggccgcaacgtcctgttagaaaaaaaatttggtataccccaaattgtcaacgacggt
atcaccgttgccaaggaaattgaactagaagatcctttagaaaacactggtgcaagactg
atccaagaagtggcatctaaaaccaaagataccgcaggtgatggaactaccaccgccaca
gttttagcacaggcattagttaaagaaggactcaagaacgtcgctgctggtacaaatccc
attgccttaaaacggggtattgataaaaccgtagaagcattggtagcagaaattgccaag
atagccaaaccagtagaaggaagtgcgatcgctcaagttgccaccgtttccgccggtaac
gatgaagaagtcggcaatatgctggccgaagcaatggagaaagtcaccaaagatggtgtc
atcaccgtagaagaatcaaaatccttaactaccgaactagaagtagtagaagggatgcaa
attgatcgcggttatatttctccctacttcatcaccaacaacgaccggatgacagtagaa
tttgaaaacgcccgcatcctcatcgccgacaaaaaaatcaacgccattcaagatttagta
cctgtactggaaaaagtagcccgtttaggtcaacctttattaatcattgctgaagatatc
gaaggtgacgctttagcaaccttggtagtcaacaaagcgcggggagtcttagccgttgct
gccattaaatcccctggttttggcgaacgtcgcaaggccttattacaagatattgccatt
ctcaccgatggacagatgatttctgaagaaatcggtttgagcttggatacagctacctta
gaaatgctgggtacagcccggaaaatcaccattgacaaggaaaacaccaccattgtctct
ggtactgacaacaaaccagaagtacaaaagcgcattgcccaaattcgcaaacagttagaa
gaaactgattctgactacgatacagaaaaactgcaagaacgtattgccaaacttgctggt
ggtgtagcagtaattaaagtgggagcagccacagaaaccgaactcaaagatcgtaaactg
cggattgaagacgctctcaacgccactaaagccgcagtagcagaaggtatcgttcctggt
ggtggtacaaccttaattcacctgtctacaaaagtagatgccattaaaaacagccttgat
gccgaagaaaaaattggggctgacattgtacaaaagtccctagaagcacctttacgccaa
atcgcagataacgccggtgcagaaggttcagtcattgtttccaaagttaaagacaccgat
attaacatcggctacaacgctgctaccggagaatttgaagatttaattgccgcaggtatt
attgatcctgctaaagttgttcgttctgcattgcaaaacgccgcttctatcgcgggtatg
gttttaactaccgaagcgatagtagtagaaaagcctgaaaagaaagctgctgctcctgat
gctggcatgggcggcatgggcggtatgggcggtatgggtggtatgggcggtatgggtggt
atgggtggtatgggtggtatgggtatgttctaa
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