Sphaerospermopsis kisseleviana: NIES73_16420
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Entry
NIES73_16420 CDS
T10228
Name
(GenBank) deoxyribodipyrimidine photolyase
KO
K01669
deoxyribodipyrimidine photo-lyase [EC:
4.1.99.3
]
Organism
skv Sphaerospermopsis kisseleviana
Brite
KEGG Orthology (KO) [BR:
skv00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
skv03400
]
NIES73_16420
Enzymes [BR:
skv01000
]
4. Lyases
4.1 Carbon-carbon lyases
4.1.99 Other carbon-carbon lyases
4.1.99.3 deoxyribodipyrimidine photo-lyase
NIES73_16420
DNA repair and recombination proteins [BR:
skv03400
]
Eukaryotic type
SSBR (single strand breaks repair)
Direct repair
NIES73_16420
Prokaryotic type
NIES73_16420
BRITE hierarchy
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Paralog
Gene cluster
GFIT
Motif
Pfam:
FAD_binding_7
DNA_photolyase
DUF2491
TTC7_N
Motif
Other DBs
NCBI-ProteinID:
BAZ80389
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Position
1819426..1820865
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AA seq
479 aa
AA seq
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MSDLILFWHRRDLRISDNTGLAAARKQTAKVVGVFCVDPDILQQDDVASARVSYMIGCLQ
ALQQRYLQAGSQLLILQDNPVTAIPKLAEALKAKAVFWNWDVEPYAQTRDKSVILALKEK
SIQTLEKNWDQLLHSPDEIFSGSKTPYTVYTPFWKNWSSKPKNNPVATLENCENLTDAEQ
EIAKKTGTINLPSAKDLGFIWDRELIIAPGETAAHKKLDKFTKFVINEYDEQRNYPAIEG
TSLLSPALKFGVIGVRKIWHKTAELLANSNSEEFTNNIIAWQKELAWREFYQHAMYHFPE
LAEGAYREVFKNFHWRNNEKHFQAWCEGKTGYPIVDAAMRQLNETGWMHNRCRMIVASFL
TKDLIINPQWGEKYFMQKLIDGDLSANNGGWQWSASSGMDPKPLRIFNPASQAQKFDADG
EYIRQWVRELKSVDTEYLISGNITPLERRAVGYPAPIVDHKKQQALFKQLYQEQKAGTD
NT seq
1440 nt
NT seq
+upstream
nt +downstream
nt
atgtctgacctgattttattttggcatcgtcgagacttacgtatttccgataatacagga
ctagcagcagctagaaaacaaactgcaaaggtagtaggtgttttttgtgtagatcctgac
attttgcaacaggatgatgttgcatctgctagagttagttacatgattggttgtttacaa
gcattgcaacaacgatatcttcaagcaggtagtcagttattaattttacaagataatcca
gtaacagccattcccaaattagctgaagctttgaaagcaaaagcagttttttggaattgg
gatgtagaaccctacgcacaaacacgggataaaagtgtaattttggcacttaaagaaaaa
agtattcagactctagagaaaaattgggatcaattattacattcacccgatgagattttt
agtggttcaaaaactccttacacagtttatactcccttctggaaaaattggagtagcaaa
cctaaaaataacccagttgcaactttagaaaactgcgaaaatttaacagatgcagaacag
gaaatagctaaaaaaacaggcacaattaatttaccatcagcgaaagatttaggttttatt
tgggatagggaattaataattgcaccaggagaaacagcagcacataaaaaattagacaaa
tttaccaagtttgtgattaatgaatatgatgaacaaagaaattatcctgctattgaaggt
acatctttattaagtccagccttaaaatttggtgtgataggagtaagaaaaatttggcat
aaaaccgcagaattattagcaaatagtaacagtgaagaattcactaataatattatcgct
tggcaaaaagaattagcttggcgggaattttatcaacacgccatgtaccattttccagaa
ttagctgaaggtgcatatagagaagtttttaaaaactttcattggcgaaataacgaaaaa
cattttcaagcttggtgtgaaggaaaaacaggttatcccatagttgatgcagccatgcga
caattaaatgaaacaggctggatgcacaatagatgtagaatgatagtagccagtttttta
accaaagatttaattataaacccgcaatggggagaaaaatattttatgcagaaactcatc
gacggtgacttatctgctaataatggtggttggcaatggagtgcgtcaagtggaatggac
cccaaaccattaagaatttttaacccagctagtcaagcacagaaatttgatgctgatggt
gaatatatcagacaatgggtgagagaattgaaatctgtagatacagaatatttaataagt
ggaaatattacacccttagaacgtcgtgcagttggttatcctgcacccattgtagatcat
aaaaaacaacaagctttgtttaaacaattgtatcaagaacagaaagctggtacagattaa
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