Sphaerospermopsis kisseleviana: NIES73_18830
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Entry
NIES73_18830 CDS
T10228
Name
(GenBank) single-stranded-DNA-specific exonuclease RecJ
KO
K07462
single-stranded-DNA-specific exonuclease [EC:3.1.-.-]
Organism
skv Sphaerospermopsis kisseleviana
Pathway
skv03410
Base excision repair
skv03430
Mismatch repair
skv03440
Homologous recombination
Brite
KEGG Orthology (KO) [BR:
skv00001
]
09120 Genetic Information Processing
09124 Replication and repair
03410 Base excision repair
NIES73_18830
03430 Mismatch repair
NIES73_18830
03440 Homologous recombination
NIES73_18830
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
skv03400
]
NIES73_18830
DNA repair and recombination proteins [BR:
skv03400
]
Prokaryotic type
SSBR (single strand breaks repair)
BER (base exicision repair)
RecJ
NIES73_18830
DSBR (double strand breaks repair)
HR (homologous recombination)
RecFOR pathway proteins
NIES73_18830
NHEJ (non-homologous end-joining)
SHDIR (short-homology-dependent illegitimate recombination)
RecET pathway
NIES73_18830
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DHH
RecJ_OB
DHHA1
Motif
Other DBs
NCBI-ProteinID:
BAZ80621
LinkDB
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Position
complement(2080369..2082408)
Genome browser
AA seq
679 aa
AA seq
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MTNDQNIKRLPNQRWQIAPANIELAAKLASLTNISPIISQLLINRGMETPEAAEKFINPE
SLNLPSPLEDFPDLAVSVELLENAIKNQEKIAICGDYDADGMTSTALLLRSLRALGADVD
YAIPSRMHEGYGINKRIVEEFKSEGVGLILTVDNGIAACEPIARARELGLKVIITDHHDL
PKELPPANAILNPKLIDESSPYRGVAGVGVAYILAVSLAQQMGELKGLVHPMLALFTLGT
IADLAPLTGVNRRWVKRGLKLLSKSTLPGVQALIQVSGVQASEGEKNQNSKTLKPEDIGF
RLGPRINAIGRIGNPQTVIELLTTDDMGIALERAMQCEQINAERQKMCEEIEQEAISLVE
DLYVEDLPKNRVLVVIKENWHHGVIGIVASRLVERYGVPVFIGTFEGEGVIRGSARGIPE
FHVFEALEDSRDLLGKYGGHKAAGGFSLPADNLADFRLRLSDFANQCLEIQHLKPLLKID
AQANLYQINQDLFQQLNILHPCGIENPDPVFWTANAQVIEQQIVGKGHIKLTLAQTIDNK
RYEIKAIAWRWRDYFPLPSRVDIAYKLRENSFNGNTNVELELVGVRLPQQVEKLFTTSKI
SKPTKFEYKQRQYTCGIYQNGVGAELRIKNSEGKVLVMQPENKIGMLGLSREDAKQVDLS
LPQYDGIIQAAMQALVGNR
NT seq
2040 nt
NT seq
+upstream
nt +downstream
nt
atgactaatgaccaaaatattaaacgtttacctaaccaacgttggcaaattgcgcccgca
aatatagaattagctgcaaaattagctagtttaacaaatatttcccctattatcagtcag
ttattgattaatcggggaatggaaacaccagaagcagcagaaaaatttatcaatcctgaa
agtttaaatttaccttctcctttggaagatttccccgatttagcggtaagtgtagaattg
ttagaaaatgctattaaaaatcaagaaaaaattgctatctgtggtgactatgatgcagac
gggatgactagcactgctttattattgcgaagtctccgcgctttgggtgctgatgttgat
tatgctatacctagtcggatgcacgaaggttatggaattaataaacgtattgttgaagaa
ttcaagagtgaaggtgtgggtttaattctcacggtagataatggtattgctgcttgtgaa
cctattgctagagctagagaattaggtttaaaagtgattattacagatcatcatgatctt
cccaaagaattaccaccagctaatgctattctcaacccaaagttaatagatgaatcttct
ccttatcggggtgttgctggtgtgggtgtagcttatattttagcggtgtctttagctcaa
caaatgggagaattaaaaggtttagttcaccccatgttagctttatttacattaggaact
attgctgatttagctcctttaactggtgtaaatcgtcgttgggtaaaacgtggtttaaag
ttattatctaagtctactttaccaggtgttcaagctttaattcaagtttctggagttcaa
gctagtgaaggagaaaaaaaccaaaattccaaaactttaaaaccagaagatattggtttt
cgtttgggtccaagaattaacgccattggcagaattggcaacccgcaaactgtgatagaa
ttgttgactactgatgatatgggaatagctctagaaagagcgatgcagtgtgaacagatt
aatgctgaacgtcaaaaaatgtgtgaggaaattgaacaggaagcaatatcattagtggaa
gatttgtatgtagaagatttacctaaaaaccgggttttagtagttattaaggaaaattgg
catcatggtgtaattggtattgttgcttctcgtttagtggaacgttacggagttccggtt
tttattggtacttttgaaggtgaaggtgtaattcgtggttctgcaaggggaatacctgaa
tttcacgtttttgaagctttagaagatagtcgtgatttactcggtaaatacgggggacat
aaagccgcaggtggtttttctttgccagcagataatttagcagattttagattacgttta
tctgattttgccaatcaatgtttagaaattcaacatttgaaacctttgctaaaaattgat
gctcaagcaaatctctatcaaatcaatcaagatttattccaacagttaaatattcttcat
ccttgcggtattgaaaaccctgatccggtgttttggactgctaacgcacaagtgattgaa
cagcaaatagttggtaaaggtcacattaaattaaccttagcgcaaactattgataataaa
aggtatgaaattaaagcgatcgcttggcgttggcgtgattattttcccctaccatcacga
gttgatattgcttacaaactccgggaaaatagctttaatggtaatactaatgtggaactg
gaattagttggggtgagactcccgcaacaggtggaaaaattatttactacatcaaaaatt
tctaaaccgacaaagtttgaatacaaacagcgtcaatacacctgtggtatttatcaaaat
ggtgtaggtgcagaattaagaattaaaaatagtgaaggtaaggtattagtcatgcagcct
gagaataaaataggtatgttagggttaagtcgtgaagatgctaaacaggttgatttatct
ttaccccaatatgatggtattattcaagctgcgatgcaggctttggtagggaataggtga
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