Sphaerospermopsis kisseleviana: NIES73_19340
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Entry
NIES73_19340 CDS
T10228
Name
(GenBank) AMP-dependent synthetase and ligase
KO
K01897
long-chain-fatty-acid---CoA ligase [EC:
6.2.1.3
]
Organism
skv Sphaerospermopsis kisseleviana
Pathway
skv00061
Fatty acid biosynthesis
skv00071
Fatty acid degradation
skv01100
Metabolic pathways
skv01212
Fatty acid metabolism
skv02024
Quorum sensing
skv04146
Peroxisome
Module
skv_M00086
beta-Oxidation, acyl-CoA synthesis
Brite
KEGG Orthology (KO) [BR:
skv00001
]
09100 Metabolism
09103 Lipid metabolism
00061 Fatty acid biosynthesis
NIES73_19340
00071 Fatty acid degradation
NIES73_19340
09140 Cellular Processes
09141 Transport and catabolism
04146 Peroxisome
NIES73_19340
09145 Cellular community - prokaryotes
02024 Quorum sensing
NIES73_19340
09180 Brite Hierarchies
09181 Protein families: metabolism
01004 Lipid biosynthesis proteins [BR:
skv01004
]
NIES73_19340
09183 Protein families: signaling and cellular processes
04147 Exosome [BR:
skv04147
]
NIES73_19340
Enzymes [BR:
skv01000
]
6. Ligases
6.2 Forming carbon-sulfur bonds
6.2.1 Acid-thiol ligases
6.2.1.3 long-chain-fatty-acid---CoA ligase
NIES73_19340
Lipid biosynthesis proteins [BR:
skv01004
]
Acyl-CoA ligase
Long/very long chain acyl-CoA ligase
NIES73_19340
Exosome [BR:
skv04147
]
Exosomal proteins
Exosomal proteins of breast milk
NIES73_19340
Exosomal proteins of breast cancer cells
NIES73_19340
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
AMP-binding
AMP-binding_C_3
Gemini_AC4_5
Motif
Other DBs
NCBI-ProteinID:
BAZ80671
LinkDB
All DBs
Position
complement(2134723..2136735)
Genome browser
AA seq
670 aa
AA seq
DB search
MSKIQPDSPFLSNVTEREYRALQSLADYTNVESLPEIWTLAARKFGNIVALHNPHAKPEV
KITYSQLSLQIQRFAAGLQVLGVNMGEDETSSTGQRISLIADNSPRWFIADQGIMTAGAV
NAVRSAQAEREELLYIIANSGSTGLVVEDIKTFKKLEAGLQDLPIKFVVLLSDETPPTAE
NYQLLNFTQLLDIGSNQTLVANKPSGDALATLIYTSGTTGKPKGVMLSHKNLLHQVKTLG
TIVQPQPGDIVLSILPTWHSYERSGEYFLLSQGCTQVYTNLRSVKEDLKEFKPNFMIAVP
RLWESIYEGVQKQFRSQPANKQKLIKFLLDMSQKYITARRIAQGLSLDHVNASDMERIGA
KIVKLALSPFQALGEKLVYAKVREATGGRIKQVISGGGALPRHIDNFFEIIGVEILQGYG
LTETSPVTNARRPWRNLRGSSGQPIPGTEVRIVDPETRQPLPAGKRGLVLLKGPQVMQGY
YKNPEATKKVIDAEGWFDSGDLGWVTPQNDLVLTGRAKDTIVLTNGENIEPQPIEDACLR
SPYIDQIMLVGQDERSLGALIVPNLEALEKWAESQNLKLSTQDDHTGSTSQKIDLESKII
QDLYRQELNREVKNRPGYRADDRIGQFTLILEPFSIENGMMTQTLKIRRHVVMERYRDII
RKLSEPKPPR
NT seq
2013 nt
NT seq
+upstream
nt +downstream
nt
atgtcaaaaatacaacctgattccccttttttatccaacgtcactgagcgagaataccga
gcattgcaaagtttggcagattacacaaatgttgagtcgttgccagaaatatggactttg
gctgccaggaaatttggtaatattgttgccttgcataacccccacgcaaaacccgaagta
aagattacctattctcagctatccttacaaattcaacgatttgcagcgggtttgcaggtt
ttaggggtgaatatgggtgaggatgaaacatctagcactggacaacgcatttccctgata
gcagataacagtccgcgctggtttattgctgatcaagggatcatgactgcgggagcagta
aacgcagtgcgtagcgcccaagctgaaagggaagaattactatatattatcgccaatagt
ggtagtacggggctggtagttgaagatatcaagacattcaaaaaactagaagctggtttg
caagacttaccgattaaattcgtagtcttactttctgatgaaacaccaccaacagcagaa
aattatcaactgctcaattttacccaattactagacattggtagcaaccaaactttagta
gcaaataaacccagcggtgatgccttggcaaccttaatttatacctctgggactacaggc
aaacctaaaggtgtgatgctttctcataaaaatttgctgcaccaagtcaagaccttggga
actatagttcaaccacaaccaggagatatagtccttagcattctgccgacatggcatagt
tatgaacgcagtggagagtattttttactttctcaaggttgtacacaagtttatacaaac
ttacgttcagttaaagaagacctgaaagaatttaaacctaatttcatgattgctgtaccc
cggttgtgggaatcaatttatgaaggagtacaaaagcagttccgcagccaaccagccaat
aaacaaaagctgattaaatttttactggacatgagccagaaatatatcacagcgcgacgc
attgcccagggattgagtttagatcatgttaatgcctcagatatggagcgaataggggcg
aaaatagtaaaattagccttgtcaccgtttcaagcactgggagaaaaattagtttatgct
aaagtgcgagaagccacagggggcagaataaaacaagtcattagtggtggtggggcgcta
ccccgacatatagacaacttttttgaaattattggtgtagagattttacaagggtatggt
ttaacagaaacctcaccagtaacaaacgcccgtcgtccgtggcgaaatttgcggggttca
tcagggcaaccaataccgggaacagaagttagaatagttgatccagaaacgagacaaccc
ttaccagcaggaaaacgaggtttggtgttgctcaaaggaccacaagtgatgcaaggatat
tacaaaaatccggaagcgacaaaaaaagtcatagatgcggaaggttggtttgatagcggt
gatctgggctgggtgacacctcaaaatgatttggtgctgactggtagggctaaagataca
attgttttgacaaacggggaaaatattgaaccgcaaccgatagaagatgcttgtttgcga
tcgccctatattgatcaaattatgctcgtaggacaagacgagcgcagtttaggagcttta
attgttcccaacctggaagccttagaaaaatgggcagaaagtcagaatttgaaattaagc
acccaagatgatcatactggctcaaccagtcaaaaaattgacttagagagtaaaataatt
caggatttatatcggcaggaattgaatcgggaagtcaaaaaccgtccaggttacagagcc
gatgacagaattggacaattcacactaattctcgaacccttttccattgaaaatggcatg
atgacacaaaccttaaaaattcgtcgtcacgttgtcatggaacgatatcgagatattata
agaaaattgagtgagccaaaaccaccgagataa
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