Sphaerospermopsis kisseleviana: NIES73_23890
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Entry
NIES73_23890 CDS
T10228
Name
(GenBank) RpoD subfamily RNA polymerase sigma 70 subunit
KO
K03086
RNA polymerase primary sigma factor
Organism
skv Sphaerospermopsis kisseleviana
Brite
KEGG Orthology (KO) [BR:
skv00001
]
09140 Cellular Processes
09142 Cell motility
02040 Flagellar assembly
NIES73_23890
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
skv03021
]
NIES73_23890
Transcription machinery [BR:
skv03021
]
Prokaryotic type
Bacterial type
RNA polymerase
Sigma factors
NIES73_23890
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GFIT
Motif
Pfam:
Sigma70_r3
Sigma70_r2
Sigma70_r4
Sigma70_r1_2
Sigma70_r4_2
Abi_alpha
Motif
Other DBs
NCBI-ProteinID:
BAZ81122
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Position
complement(2636428..2637597)
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AA seq
389 aa
AA seq
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MNQANNVLDIDYRPDLEINTPDIEEELLLIEDEEDLLLVDDGDIDDFLEPQTDEDDAKSG
KAAKSRRRTQSKKKHFTEDSIRLYLQEIGRIRLLRADEEIELARKIADLLELERVRDHLY
EQLEREPEFKEWAEAVQLPLPTFRYRLHVGRRAKDKMVQSNLRLVVSIAKKYMNRGLSFQ
DLIQEGSLGLIRAAEKFDHEKGYKFSTYATWWIRQAITRAIADQSRTIRLPVHLYETISR
IKKTTKLLSQEMGRKPTEEEIATRMEMTIEKLRFIAKSAQLPISLETPIGKEEDSRLGDF
IESDGETPEDQVSKNLLREDLEKVLDSLSPRERDVLRLRYGLDDGRMKTLEEIGQIFNVT
RERIRQIEAKALRKLRHPNRNSVLKEYIR
NT seq
1170 nt
NT seq
+upstream
nt +downstream
nt
atgaaccaggctaacaacgtactcgatattgattatcggcctgacctagaaataaatacg
cctgatatcgaagaagaactcttattaatcgaggatgaagaggacttactgctagttgat
gacggcgatattgatgattttttagagcctcagactgatgaggacgacgcaaagtctgga
aaagccgctaaatcgcgtcgtcggacacaaagcaagaaaaaacactttaccgaagactcg
attcgcctttacctgcaagaaatcggtcggattcgtttattacgcgcagacgaagaaatt
gaactggcgcggaaaatcgctgatttactggaattagaaagagtaagggatcatctgtac
gaacagttagaacgagaacccgaatttaaggaatgggcagaagcggtacaactgccatta
ccaactttccgttatcgtctgcacgtaggccgtcgggcgaaagataaaatggtgcaatcg
aatctgcggcttgtggtttctattgctaaaaaatatatgaatcgtggcttatccttccaa
gacttaattcaagaaggtagcctgggtttgattcgggcagcagaaaaatttgaccatgag
aaaggttataagttttctacctacgctacatggtggattagacaagcaattacaagagcg
atcgctgatcaatctcgtactattcgtctaccagttcacctctacgaaactatatcacgg
atcaagaaaactaccaagctattatctcaagaaatgggtcgcaaacctacggaagaagaa
attgcgactcgcatggaaatgactattgagaaactgcggtttattgctaagtcagcccag
ttgcccatttcattagaaacacccattggtaaagaagaagattcccgtttaggcgatttt
attgaatctgatggcgaaacaccagaagatcaagtttctaagaacttactccgtgaagac
ctagaaaaagtcctcgatagtctcagtcctcgtgaaagagatgtgttgagattacgctac
ggcttagatgatggtcgcatgaaaaccttggaagaaatcggacagattttcaacgttacc
cgtgaacgcatccgccaaatagaggccaaagcactccgcaagttacgtcaccccaatcgt
aacagcgtcctcaaggagtatattcggtaa
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