Sphaerospermopsis kisseleviana: NIES73_47660
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Entry
NIES73_47660 CDS
T10228
Name
(GenBank) DNA topoisomerase I
KO
K03168
DNA topoisomerase I [EC:
5.6.2.1
]
Organism
skv Sphaerospermopsis kisseleviana
Brite
KEGG Orthology (KO) [BR:
skv00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03032 DNA replication proteins [BR:
skv03032
]
NIES73_47660
03400 DNA repair and recombination proteins [BR:
skv03400
]
NIES73_47660
Enzymes [BR:
skv01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.1 DNA topoisomerase
NIES73_47660
DNA replication proteins [BR:
skv03032
]
Prokaryotic type
DNA Topoisomerases
NIES73_47660
DNA repair and recombination proteins [BR:
skv03400
]
Prokaryotic type
DSBR (double strand breaks repair)
NHEJ (non-homologous end-joining)
SHIIR (short-homology-independent illegitimate recombination)
Facilitator
NIES73_47660
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Topoisom_bac
Toprim
Toprim_4
Toprim_2
Motif
Other DBs
NCBI-ProteinID:
BAZ83478
LinkDB
All DBs
Position
5224812..5226977
Genome browser
AA seq
721 aa
AA seq
DB search
MPKRLLVVESPGKVKKLSQILGTDWIVRASCGHIRELSNEGEDSLGFTIEGNSVRCHYIP
RDQRAKENIQKLKAAVKQVDEVILATDPDREGETIAWHLKETLGLREPKRVVYTEITPSA
VKSAIAHPRKLDSNLIGAGLCRDCLDKLVGYKGSPLVWALNNGAKSVGRVQSATLHLICQ
REREIQVFVPQDYWSVWVDYQEGFRVFYKGTANTPTETPETETETHDDAASNNPDKPESK
RVLSEAEADRLVAEAKQHPHQVIQLEGKLTYRQPPPPFTTSTLQQAAGSKLKFAPEKTMQ
VAQKLYEAGLITYMRTDSVMLSPEFCASVRKWLEEHDPQNVPQQVTKHRSSKTAQEAHEA
IRPTDVFRPSVQLRAELPEDEFNLYVMIWKRAVASQCRPAQVRKTLIITQSGNILWQARG
QVVEFYGYAKYWTNLGKDAVLPIVQQGQKLTLENAGHEKKQTQPPPRYSEPKLVQLMERK
GIGRPSTYAPTVATLKKRNYIELIKDHLHPTSLGLEVDEFLQKALPDLLEAEFTAKMEAE
LDKIAEGKNSWQSYLTTWNESYFVPALSKAKTVVINSGNTGNNHGKVERKYESSKTKCPE
CSNFLAKIPSSKVKKKYFLKCVSGCENIVLFWSDFHKRWEAPKTKTSADEKTNKSETKLT
SYPCPVCKKPLEEYSYIKDGENKTMLRCSDQDSWKDKKHKDAAYFHTAKGWWSPKFGNLI
I
NT seq
2166 nt
NT seq
+upstream
nt +downstream
nt
atgcccaaacgcctcttagtggttgaatcacccggtaaagtcaaaaaactgagtcaaatt
ctcggtacagattggatagttcgtgctagttgtggacatatccgcgaactcagtaacgag
ggtgaagattcgctaggatttacaatagaaggtaacagtgtccgctgccattatatcccc
cgtgaccaacgcgctaaagaaaacattcaaaaacttaaagctgctgttaaacaagttgat
gaagtcattttagcaacggacccagatagagaaggagaaaccattgcttggcatctcaaa
gaaaccctgggattaagagaacccaagcgagtagtttatactgagattacaccatcggcg
gttaaaagtgcgatcgctcatcctagaaaacttgattctaacttaatcggtgcgggatta
tgtcgagattgtctcgataagctagtaggatacaaaggtagtcctctagtttgggcatta
aataatggtgcaaaaagcgtcggtagagtccaaagcgcgacattacacctcatttgtcag
cgcgaaagagaaatacaagtatttgtcccccaagattattggagtgtgtgggtagattat
caagaaggatttcgcgttttttacaaaggtacagctaacactcccacagaaacaccagaa
acggaaacggaaacccacgatgatgcagctagtaataacccagacaaaccagaatctaag
cgggttttatcagaagcagaagcagatagattagttgcagaagccaaacaacatccccat
caagtcatccaacttgaaggtaaactcacctatcgtcaaccccctccaccttttaccact
tccaccctacagcaagcagccggatctaaactgaaatttgccccggaaaaaactatgcag
gtggcacagaagctatatgaggcgggtttaattacctatatgcgaacagattcagtgatg
ttaagtcctgaattttgtgccagtgtgcgtaagtggttagaagaacatgatccgcaaaac
gtaccacaacaagtaacaaaacatcgtagtagcaaaacagcacaagaagcacacgaagca
attcgtcctacagatgtatttcgtccgtcggtacagttacgagcagaattacctgaagat
gagtttaacctgtatgtgatgatttggaaaagagcagttgcgtctcaatgtcgtcccgca
caggtgagaaagactttaataattactcaatcaggtaatattttatggcaagctagggga
caagttgtagaattttatggttatgcgaaatattggactaatttgggtaaagatgccgtt
ttaccaattgtacaacaggggcaaaaattaactttagaaaatgccggacatgaaaagaaa
caaacccaaccaccaccaagatatagtgaaccaaaactggtacaattaatggaaagaaaa
ggtattggtcgtcctagtacctacgcgcctacagtggctacattaaaaaaacgtaattat
attgaattaataaaagatcatcttcatcctacaagtttagggttagaagttgatgagttt
ttacaaaaggcattaccagatttattagaagcagaatttaccgccaagatggaagccgaa
ttagataaaattgctgaaggtaaaaattcctggcaatcttatttaactacttggaatgaa
agttattttgtccctgcgctgtctaaagctaaaactgtggttattaattcaggaaatact
ggtaataatcatggtaaagttgagcgtaaatatgaaagttcaaaaaccaaatgtcctgaa
tgtagtaactttttagcgaaaattcctagtagtaaggtgaagaagaaatactttcttaaa
tgtgtgagtgggtgtgaaaatattgttttgttttggagtgattttcataaacgttgggaa
gcaccgaaaactaaaacatcagcagatgaaaagactaataaatcggaaactaaactcaca
tcttatccttgtccggtatgtaagaaaccgttggaggagtatagttatattaaagatggg
gagaataaaactatgttacggtgttctgatcaagattcttggaaggataaaaaacataag
gatgcggcttattttcatactgcaaaagggtggtggagtcctaagtttgggaatttgata
atataa
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