Streptomyces koyangensis: D0C37_03905
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Entry
D0C37_03905 CDS
T06436
Name
(GenBank) DNA-3-methyladenine glycosylase 2 family protein
KO
K13529
AraC family transcriptional regulator, regulatory protein of adaptative response / DNA-3-methyladenine glycosylase II [EC:
3.2.2.21
]
Organism
sky
Streptomyces koyangensis
Pathway
sky03410
Base excision repair
Brite
KEGG Orthology (KO) [BR:
sky00001
]
09120 Genetic Information Processing
09124 Replication and repair
03410 Base excision repair
D0C37_03905
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
sky03000
]
D0C37_03905
03400 DNA repair and recombination proteins [BR:
sky03400
]
D0C37_03905
Enzymes [BR:
sky01000
]
3. Hydrolases
3.2 Glycosylases
3.2.2 Hydrolysing N-glycosyl compounds
3.2.2.21 DNA-3-methyladenine glycosylase II
D0C37_03905
Transcription factors [BR:
sky03000
]
Prokaryotic type
Helix-turn-helix
AraC family
D0C37_03905
DNA repair and recombination proteins [BR:
sky03400
]
Prokaryotic type
SSBR (single strand breaks repair)
BER (base exicision repair)
DNA glycosylases
D0C37_03905
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
AlkA_N
Ada_Zn_binding
HTH_18
HhH-GPD
HTH_AraC
DARPP-32
Motif
Other DBs
NCBI-ProteinID:
AXQ53836
UniProt:
A0A385D691
LinkDB
All DBs
Position
complement(939453..940931)
Genome browser
AA seq
492 aa
AA seq
DB search
MYTDTERCVRAVQSKDARFDGWFFTAVLTTGIYCRPSCPAVPPKPANMVFHPSAAACQQA
GFRACKRCRPDTSPGSPEWNQRADAVARAMRLIADGTVDREGVPGLAARLGYSTRQIERQ
LLAELGAGPLALARAQRAQTARLLIETTVLPMADIAFAAGFSSVRTFNDTVREVYALSPT
ELRTRSRARPGAGGDPAPGAVSLRLPLRTPFTPDNVFGHLAATAVPGVEEWRDGAYRRTL
DLPHGPGIATLTPAPDHIGCRLALTDLRDLTLAISRCRRLLDLDADPVAVDERLAADPAL
APLVAKAPGRRVPRTVDAAEFAVRAVLGQQVSTAAARTHAARLATAYGTPVEDPAGGLTH
LFPSPAQLAGLDPEQLAMPRSRRTTLTTLVAALADGSIGLGPEEDWDEARARLLALPGFG
PWTVEIIAMRALGDPDAFPATDLGVRRAAERLGLPGAPGALTARAADWRPWRAYAVQYLW
ATDDHPINLLPA
NT seq
1479 nt
NT seq
+upstream
nt +downstream
nt
atgtacaccgacaccgagcgctgcgtgcgggccgtgcagtcgaaggacgcccggttcgac
ggctggttcttcaccgccgtgctgaccaccgggatctactgccgccccagctgcccggcc
gtgccgcccaagccggccaacatggtgttccaccccagcgccgccgcctgccagcaggcc
ggtttccgggcctgcaagcgctgccgccccgacaccagccccggctcaccggagtggaac
cagcgcgccgacgccgtcgcccgcgccatgcggctcatcgccgacggcaccgtcgaccgc
gagggcgtccccggcctcgccgcccggctcggctacagcacccgccagatcgagcgccag
ctcctcgcggaactcggcgcgggaccgctcgcgctggcccgcgcccagcgggcccagacc
gcccggctgctgatcgagaccaccgttctgccgatggccgacatcgccttcgccgcgggt
ttctcctcggtccgcaccttcaacgacaccgtccgcgaggtgtacgcgctctccccgacc
gagctgcgcacccgcagccgcgcccggcccggtgcgggcggcgacccggcgcccggagcg
gtctcgctgcggctgccgctgcgcacccccttcaccccggacaacgtcttcggacacctc
gccgccaccgccgtccccggtgtcgaggagtggcgtgacggcgcctaccgccgcaccctc
gacctcccgcacggcccgggcatcgccaccctcaccccggcccccgaccacatcggctgc
cggctggccctcaccgacctgcgcgacctcaccctcgccatcagccgctgccgccgcctg
ctcgacctcgacgccgacccggtcgccgtggacgagcggctcgccgccgaccccgccctc
gcaccgctcgtcgccaaggcgccgggccgccgggtgccgcgtaccgtcgacgccgccgag
ttcgccgtccgagccgtcctcggccagcaggtctccaccgctgctgcccgcacccacgcg
gcccgcctcgccaccgcgtacggcacgcccgtcgaggacccggccggcggcctcacccac
ctcttcccgagccccgcccagctcgccgggctcgacccggagcagctcgccatgccccgc
agccgccgtaccaccctcaccacgctggtcgccgccctcgccgacggctcgatcggtctg
ggccccgaggaggactgggacgaggcacgcgcccggctgctggctctgcccggcttcggc
ccgtggaccgtcgagatcatcgcgatgcgcgccctcggcgaccccgacgccttccccgcc
accgacctcggggtgcgccgggccgccgaacgcctcggcctgcccggcgcccccggcgcg
ctcaccgcccgcgccgccgactggcgcccctggcgggcgtacgccgtgcagtacctgtgg
gccaccgacgaccacccgatcaacctcctgcccgcctga
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