Streptomyces koyangensis: D0C37_05185
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Entry
D0C37_05185 CDS
T06436
Name
(GenBank) ribonuclease D
KO
K03684
ribonuclease D [EC:
3.1.13.5
]
Organism
sky
Streptomyces koyangensis
Brite
KEGG Orthology (KO) [BR:
sky00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03016 Transfer RNA biogenesis [BR:
sky03016
]
D0C37_05185
Enzymes [BR:
sky01000
]
3. Hydrolases
3.1 Acting on ester bonds
3.1.13 Exoribonucleases producing 5'-phosphomonoesters
3.1.13.5 ribonuclease D
D0C37_05185
Transfer RNA biogenesis [BR:
sky03016
]
Prokaryotic type
3'processing and CCA adding factors
3'processing factors
D0C37_05185
BRITE hierarchy
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Gene cluster
GFIT
Motif
Pfam:
DNA_pol_A_exo1
DNA_pol_A_exoN
HRDC
Motif
Other DBs
NCBI-ProteinID:
AXQ54048
UniProt:
A0A385D6R2
LinkDB
All DBs
Position
1214118..1215416
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AA seq
432 aa
AA seq
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MTDAQETAADPSPLAPSQPPSPSDADGPPAALPAPVPLLAPREGVPEVVASEEALAETVA
RYAAGSGPLAVDAERASGYRYGQRAYLVQLRREGAGTALIDPVACPDLSGLGQVVEETEW
LLHAATQDLPCLRDIGMVPQRLFDTELAGRLAGFARVGLGAMVENVLGYSLEKGHSAVDW
STRPLPEPWLRYAALDVELLADLRDALEEELAGQGKLDWAHQEFDAIAAAPPAPPRKDPW
RRTSGMHKVRRRRQLAVVRELWNARDKIAQRRDISPGKVLPDAAIVEAALAMPVDVQALG
RLRGFSGRAGRRQLDQWQGAVDRARALTETELPQPGAAPSGPPPPRAWADRDPAAAARLS
KARADISARAEELRLPQENLITPDTVRRLCWEPPADHGPEAVSAALAGYGARPWQIEQVT
PLLVEALDAPAA
NT seq
1299 nt
NT seq
+upstream
nt +downstream
nt
gtgaccgacgcccaagagaccgcagccgacccttcgccgctcgccccgtcccagccgccg
agcccgtccgacgcggacggcccaccggccgccctcccggctccggtcccgctgctggcc
ccccgcgagggggtgcccgaggtggtcgcctccgaggaggcgctcgcggagacggtggcg
cggtacgcggccggcagcggtccgctggcggtcgacgccgagcgggcctcgggctaccgc
tacgggcagcgcgcgtacctcgtgcagctgcgccgtgagggcgccggcacggccctgatc
gacccggtggcctgccccgacctctccggcctcgggcaggtcgtcgaggagaccgagtgg
ctgctgcacgccgccacccaggacctgccgtgcctgcgcgacataggcatggtcccgcag
cgcctcttcgacaccgagctggccgggcggctcgccggcttcgcccgggtgggactcggc
gcgatggtggagaacgtcctcggctactcgctggagaagggccactccgccgtcgactgg
tcgacccgcccgctgcccgaaccgtggctgcggtacgcggcgctcgacgtggaactcctc
gccgacctgcgcgacgcgctggaggaggagctggccgggcagggcaagctcgactgggcg
caccaggagttcgacgccatcgccgccgctcccccggcgccgccccgcaaggacccctgg
cggcggacctccggcatgcacaaggtgcgccgccgccggcagctcgccgtggtgcgggag
ctgtggaacgcccgggacaagatcgcccagcggcgcgacatctcgccgggcaaggtgctc
ccggacgccgccatcgtggaggccgcgctcgccatgccggtggacgtgcaggcgctcggg
cggctgcgcggcttcagcggacgggccggccggcgccagctcgaccagtggcagggtgcc
gtggaccgggcgcgggcgctgaccgagacggagctgccgcagccgggcgccgccccgtcg
ggcccgcccccgccgcgtgcctgggccgaccgggacccggccgccgccgcccggctgtcg
aaggcccgcgcggacatctcggcgcgcgccgaggagctgcggctgccgcaggagaacctg
atcacccccgacaccgtgcgccggctgtgctgggagcccccggcggaccacgggcccgag
gcggtctcggccgcgctcgccgggtacggggcacggccctggcagatcgaacaggtgacc
ccgctgctggtcgaggcgctggacgcgcccgccgcgtag
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