Streptomyces koyangensis: D0C37_06770
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Entry
D0C37_06770 CDS
T06436
Name
(GenBank) RecQ family ATP-dependent DNA helicase
KO
K03654
ATP-dependent DNA helicase RecQ [EC:
5.6.2.4
]
Organism
sky
Streptomyces koyangensis
Pathway
sky03018
RNA degradation
Brite
KEGG Orthology (KO) [BR:
sky00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
03018 RNA degradation
D0C37_06770
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
sky03019
]
D0C37_06770
03400 DNA repair and recombination proteins [BR:
sky03400
]
D0C37_06770
Enzymes [BR:
sky01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.4 DNA 3'-5' helicase
D0C37_06770
Messenger RNA biogenesis [BR:
sky03019
]
Prokaryotic type
Bacterial mRNA degradation factors
RNA degradosome components
Helicases
D0C37_06770
DNA repair and recombination proteins [BR:
sky03400
]
Prokaryotic type
DSBR (double strand breaks repair)
NHEJ (non-homologous end-joining)
SHDIR (short-homology-dependent illegitimate recombination)
Supressor
D0C37_06770
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DEAD
Helicase_C
ResIII
RecQ_Zn_bind
Pribosyltran
Motif
Other DBs
NCBI-ProteinID:
AXQ54334
UniProt:
A0A385D8S8
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All DBs
Position
1630849..1633011
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AA seq
720 aa
AA seq
DB search
MSNEELRTTADSVLARLVGDPTGAARLREDQWLAIEALVAEGRRALVVQRTGWGKSAVYF
VATALLRARGAGPTVIVSPLLALMRNQVEAAARAGISARTINSANPEEWDEVQAQVAAGE
VDVLLVSPERLNNPDFRDNVLPKLSAATGLLVVDEAHCISDWGHDFRPDYRRLRSMLAEL
PQGVPVLATTATANARVTADVAEQLGTGSGSDALVLRGPLDRESLSLGVLRLPDSAHRLA
WLAEHLDELPGSGIIYTLTVATAEEVTAFLRQRGHAVASYTGRTENADRQQAEDDLLGNR
VKALVATSALGMGFDKPDLGFVVHLGSPSSPIAYYQQVGRAGRGVDHAEVLLLPGREDEA
IWKYFASLAFPPEEQVRRTLDVLAGAERPLSLPALEPLVELRRSRLETMLKVLDVDGAVR
RVRGGWVSTGEPWSYDSERYAWVAKQRAAEQQAMREYAATDGCRMEFLRRLLDDEEAAPC
GRCDNCAGPRFGGDVSTTSLEAATGELRRAGVEVEPRRMWPTGLASVGLDLKGRIPPGEQ
AAPGRALGRLSDIGWGNRLRPLLAPDAPDEPVSEEVTRAVVGVLADWAKGPGGWASGDAD
ALARPVGVVTVPSRRRPRLVGALGARIAEIGRMPLLGSLELTPEAAERMPSRSNSAQRLR
ALEGSLTVPAELAGALAATPGPVLLVDDSTESGWTLAVSARLLRRAGAAAVLPLVLAVEG
NT seq
2163 nt
NT seq
+upstream
nt +downstream
nt
atgagcaacgaagagctgcggaccacggccgactccgtcctcgcccggctggtgggcgac
ccgacgggcgccgcccggctgcgcgaggaccagtggctcgccatcgaggcgctggtggcc
gagggccgccgggcgctggtcgtgcagcggacgggctggggcaagtcggcggtgtacttc
gtggcgacggcgctgctgcgggcccggggcgccgggccgacggtgatcgtctcgccgctg
ctggccctcatgcgcaaccaggtcgaggcggccgcccgcgcggggatctccgcgcgcacg
atcaactcggccaaccccgaggagtgggacgaggtccaggcccaggtggcggcgggcgag
gtggacgtcctgctggtcagcccggagcggctcaacaacccggacttccgggacaacgtc
ctgccgaagctgtcggccgccaccggtctgctggtggtggacgaggcgcactgcatctcg
gactggggccatgatttccggccggactaccggcggctgcgttccatgctggcggagctg
ccgcagggcgtcccggtcctcgccaccacggcgacggccaacgcccgggtgacggccgac
gtcgccgagcagctcggcaccggttcgggctccgacgcgctggtgctgcgcgggccgctg
gaccgggagagcctcagtctcggtgtgctgcggctgcccgactcggcgcaccggctggcc
tggctggccgagcacctcgacgagctgccggggtcggggatcatctacaccctgacggtc
gccaccgccgaggaggtcaccgccttcctgcgccagcggggtcacgccgtcgcctcgtac
acgggccggaccgagaacgccgaccgccagcaggccgaggacgatctcctggggaaccgg
gtgaaggccctcgtcgccacctccgcactggggatggggttcgacaagccggacctcggc
ttcgtcgtccatctcggctcaccgtcctcccccatcgcctattaccagcaggtcggccgt
gccggccgcggcgtggaccacgccgaggtgctgctgctgcccggccgggaggacgaggcg
atctggaagtacttcgcctcgctggccttccccccggaggagcaggtgcgccgcaccctc
gacgtgctggcgggggccgagcggccgctctccctgccggcgctggagccgctggtggag
ctgcgccggtcccggctggagacgatgctgaaggtcctggacgtggacggggcggtgcgc
cgggtgcgcggcggctgggtgtcgacgggcgagccctggtcgtacgacagcgagcggtac
gcctgggtggcgaagcagcgggcggcggagcagcaggcgatgcgtgagtacgcggcgacc
gacgggtgccggatggagttcctgcgccggctgctggacgacgaggaggcggcgccctgc
ggccgctgcgacaactgcgcgggcccccggttcggcggggacgtctcgaccacctcgctg
gaggccgccaccggcgagctgcgccgggcgggtgtggaggtggagccccgccggatgtgg
cccaccggcctcgcctcggtcggcctggacctgaaggggcgcatcccgccgggtgagcag
gccgcgccgggccgggcgctgggccgcctctcggacatcggctgggggaacagactgcgt
cccctgctggcccccgacgccccggacgagccggtgtccgaggaggtgacgcgggccgtg
gtcggggtgctggccgactgggcgaaggggcccgggggctgggcgtcgggcgatgcggac
gccctggcgcgcccggtgggtgtggtgacggtgccttcgcgccgccggccccggctggtc
ggcgcgctcggtgcgcggatcgccgagatcgggcggatgccgctgctcggttcgctggag
ctgacgccggaggccgccgagcggatgccgtcgcggagcaacagcgcccagcgactgcgg
gcgttggaggggtcgctgaccgtgcccgcggagctggccggggcgctggcggcgacgccc
ggtccggtgctgctggtggacgactccacggagagcgggtggacgctggcggtctcggcg
cggctgctccggcgggccggagcagcggcggtgttgccgctggtcctcgccgtggagggc
tga
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