Streptomyces koyangensis: D0C37_07110
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Entry
D0C37_07110 CDS
T06436
Symbol
rimO
Name
(GenBank) 30S ribosomal protein S12 methylthiotransferase RimO
KO
K14441
ribosomal protein S12 methylthiotransferase [EC:
2.8.4.4
]
Organism
sky
Streptomyces koyangensis
Brite
KEGG Orthology (KO) [BR:
sky00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03009 Ribosome biogenesis [BR:
sky03009
]
D0C37_07110 (rimO)
Enzymes [BR:
sky01000
]
2. Transferases
2.8 Transferring sulfur-containing groups
2.8.4 Transferring alkylthio groups
2.8.4.4 [ribosomal protein uS12] (aspartate89-C3)-methylthiotransferase
D0C37_07110 (rimO)
Ribosome biogenesis [BR:
sky03009
]
Prokaryotic type
ribosomal protein modification factors
D0C37_07110 (rimO)
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
UPF0004
Radical_SAM
TRAM_2
TRAM
YajR_YAM
Motif
Other DBs
NCBI-ProteinID:
AXQ54394
UniProt:
A0A385D8Y9
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All DBs
Position
complement(1704258..1705730)
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AA seq
490 aa
AA seq
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MPERRTVALVTLGCARNEVDSEELAGRLEADGWQLVEDAEAADVAVVNTCGFVEAAKKDS
VDALLEANDLKSQGRTQAVVAVGCMAERYGKELAEALPEADGVLGFDDYADISDRLQTIL
GGGIHASHTPRDRRKLLPISPAERQDSAVALPGHAQEPAAAPADLPDGLAPASGPRAPLR
RRLGTSPVASVKLASGCDRRCSFCAIPSFRGSFISRRPSDVLQETRWLAEQGVKEIMLVS
ENNTSYGKDLGDIRLLETLLPELAEVDGIERVRVSYLQPAEMRPGLIDVLTSTPKVAPYF
DLSFQHSAPGVLRAMRRFGDTDRFLGLLEQIRAKAPEAGVRSNFIVGFPGESEADVAELE
RFLTGARLDAIGVFGYSDEDGTEAAGYEGKLPEEEVAERLARVSRLAEELVSQRADERVG
ETVEVLVESVDEEEGAVGRAAHQAPETDGQILFTSGADLTPGRMVVAKVVGTEGVDLVAE
PLHLIEEAGR
NT seq
1473 nt
NT seq
+upstream
nt +downstream
nt
atgcctgaacgccgtaccgtcgctctcgtcactctcggatgcgcccgtaacgaggtggat
tcggaggagctcgcaggccgcctggaggcggacggctggcagctcgtcgaggacgccgaa
gccgccgatgtcgccgtcgtcaacacctgcggcttcgtcgaagccgccaagaaggactcc
gtcgacgccctcctcgaggccaacgacctcaagagccagggcagaacccaggccgtggta
gccgtcggctgcatggccgagcggtacggcaaggagctggccgaggccctccccgaggcc
gacggggtgctcggcttcgacgactacgccgacatctccgaccggctccagaccatcctg
ggcggcggcatccacgcctcccacaccccgcgcgaccggcgcaagctgctgccgatcagc
cccgccgagcgccaggacagcgccgtcgccctccccggccacgcccaggagccggcggcc
gcccccgccgacctccccgacggcctcgcgcccgcctccgggccgcgcgccccgctccgc
cgccggctgggcaccagcccggtcgcctcggtcaagctggcctccggctgcgaccggcgc
tgctccttctgcgccattccctcgttccgcggctccttcatctcccggcgcccctcggac
gtgctccaggagacgcgctggctcgccgagcagggcgtgaaggagatcatgctggtctcc
gagaacaacacctcgtacggcaaggacctcggggacatccggctcctggagacgctgctg
ccggagctggcggaggtggacggcatcgagcgggtgcgcgtcagctacctccagcccgcc
gagatgcggcccggcctcatcgacgtcctcacctcgacgccgaaggtcgccccctacttc
gacctctccttccagcactccgcgcccggcgtgctgcgcgccatgcgccgcttcggcgac
accgaccgcttcctcggcctgctggagcagatccgcgccaaggcccccgaggccggtgtc
cgctccaacttcatcgtcggcttccccggcgagagcgaggcggacgtggccgagctggag
cgcttcctgaccggcgcccgtctcgacgccatcggcgtcttcggctactccgacgaggac
ggcaccgaggccgccgggtacgagggcaagctccccgaggaggaggtcgccgagcgtctc
gcccgggtctcccgactcgccgaggaactcgtctcgcagcgcgcggacgagcgggtcggt
gagaccgtggaggtactcgtcgaatccgtcgacgaggaagagggcgccgtcggccgggcc
gcccaccaggcccccgagaccgacggacagatcctcttcacgagcggcgcggacctcacc
ccgggccgtatggtcgtggccaaggtggtcggcaccgagggagtggacctcgtcgccgaa
cccctgcacctgatcgaggaggcgggcagatga
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