KEGG   Streptomyces koyangensis: D0C37_07285
Entry
D0C37_07285       CDS       T06436                                 
Symbol
truB
Name
(GenBank) tRNA pseudouridine(55) synthase TruB
  KO
K03177  tRNA pseudouridine55 synthase [EC:5.4.99.25]
Organism
sky  Streptomyces koyangensis
Brite
KEGG Orthology (KO) [BR:sky00001]
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03016 Transfer RNA biogenesis [BR:sky03016]
    D0C37_07285 (truB)
Enzymes [BR:sky01000]
 5. Isomerases
  5.4  Intramolecular transferases
   5.4.99  Transferring other groups
    5.4.99.25  tRNA pseudouridine55 synthase
     D0C37_07285 (truB)
Transfer RNA biogenesis [BR:sky03016]
 Eukaryotic type
  tRNA modification factors
   Psudouridine synthases
    D0C37_07285 (truB)
 Prokaryotic type
    D0C37_07285 (truB)
SSDB
Motif
Pfam: TruB_N TruB_C TruB_C_2 PseudoU_synth_2 DKCLD
Other DBs
NCBI-ProteinID: AXQ54419
UniProt: A0A385D8N1
LinkDB
Position
complement(1756277..1757182)
AA seq 301 aa
MKQSSSVPDGLVVVDKPSGFTSHDVVAKMRGIARTRRVGHAGTLDPMATGVLVLGVERAT
KLLGHLALTEKEYLGTIRLGQTTVTDDAEGEITASADASGIGRAAVDAGVAELTGDIMQV
PSKVSAIKIDGKRSYTRVREGEEFEIPARPVTVSSFTVYDVREDKAADGTPVLDLVVSVV
CSSGTYVRALARDLGASLGVGGHLTALRRTRVGPYGLDAAKTLEQLQEELTVMPVAEAAA
AAFPRWDLDERRAQLVLNGVRIDMPEEYAGRGPVGVFDPAGRCLALVEEQKGRAKSVAVF
A
NT seq 906 nt   +upstreamnt  +downstreamnt
atgaagcagtccagctcggtgccggacggcctggtcgtcgtcgacaagccgtccggcttc
acctctcatgacgtcgtcgccaagatgcgcggcatcgcccggacccgccgcgtgggacac
gccggcaccctggaccccatggcgaccggggtcctcgtcctgggcgtggaacgcgcgacc
aaactcctcggccacctcgcgctgacggagaaggagtacctgggcaccatccgcctcggc
cagaccaccgtcaccgacgacgccgagggcgagatcaccgcctcggcggacgcctccggc
atcggccgggcggccgtggacgccggggtcgccgagctgaccggcgacatcatgcaggtg
ccgtccaaggtcagcgccatcaagatcgacggcaagcggtcgtacacccgcgtccgcgag
ggcgaggagttcgagatcccggcccgcccggtcaccgtctcgtccttcaccgtctacgac
gtccgcgaggacaaggccgccgacggcacccccgtcctcgacctggtcgtctcggtcgtc
tgctcctccggcacgtacgtccgggcgctcgcccgcgacctcggcgcctccctcggcgtc
ggcggccacctcaccgcgctgcggcgcacccgggtgggaccgtacggactggacgcggcc
aagaccctcgaacagctccaggaggagctgaccgtgatgcccgtcgccgaggccgccgcc
gcggccttcccgcgctgggacctcgacgagcggcgcgcccagctcgtcctcaacggcgtg
cgcatcgacatgcccgaggagtacgcgggccgcggccccgtgggcgtcttcgacccggcc
gggcgctgcctggccctggtcgaggagcagaaggggcgcgccaagagcgtcgccgtcttc
gcctga

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