Streptomyces koyangensis: D0C37_09045
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Entry
D0C37_09045 CDS
T06436
Symbol
lysA
Name
(GenBank) diaminopimelate decarboxylase
KO
K01586
diaminopimelate decarboxylase [EC:
4.1.1.20
]
Organism
sky
Streptomyces koyangensis
Pathway
sky00300
Lysine biosynthesis
sky00470
D-Amino acid metabolism
sky01100
Metabolic pathways
sky01110
Biosynthesis of secondary metabolites
sky01120
Microbial metabolism in diverse environments
sky01230
Biosynthesis of amino acids
Module
sky_M00016
Lysine biosynthesis, succinyl-DAP pathway, aspartate => lysine
Brite
KEGG Orthology (KO) [BR:
sky00001
]
09100 Metabolism
09105 Amino acid metabolism
00300 Lysine biosynthesis
D0C37_09045 (lysA)
09106 Metabolism of other amino acids
00470 D-Amino acid metabolism
D0C37_09045 (lysA)
Enzymes [BR:
sky01000
]
4. Lyases
4.1 Carbon-carbon lyases
4.1.1 Carboxy-lyases
4.1.1.20 diaminopimelate decarboxylase
D0C37_09045 (lysA)
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Ortholog
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Gene cluster
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Motif
Pfam:
Orn_Arg_deC_N
Orn_DAP_Arg_deC
Ala_racemase_N
NBD_C
Motif
Other DBs
NCBI-ProteinID:
AXQ54730
UniProt:
A0A385D9U9
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All DBs
Position
complement(2156021..2157412)
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AA seq
463 aa
AA seq
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MSRSAHPAGPRHADVLPEGHYSAPAEDLNALDPKVWARTVRRDEDGVLTVGGLPVTRLAE
EFGTPAFFLDETDFRARCRAWRDAFGAEADVFYAGKAFLSRAVVRWLHEEGLNLDVCSGG
ELATALDAGMPAARIAFHGNNKTTAEIRRAVEAGVGRIVLDSFEEIVRVAHVADELGVRQ
PVQIRVTVGVEAHTHEFIATAHEDQKFGLALAGGQAAEAVRRALKLDGLELIGIHSHIGS
QIFDMAGFEVSARRVVQLLAEVRDEHGVELPEIDLGGGLGIAYTSDDDPREPHEIAKALG
EIVTRECESAGLATPRISVEPGRAIVGPTAFTLYEVGTVKPLEGLRTYVSVDGGMSDNIR
TALYDAEYTVTLASRTSDAEPMLVRVVGKHCESGDIVVRDAFLPADLAPGDLLAVPATGA
YCRSMASNYNHALRPPVVAVDEGSARVVVRRETEEDLLRLDVG
NT seq
1392 nt
NT seq
+upstream
nt +downstream
nt
atgagtcgttccgcccaccccgccggaccccgccacgccgatgtcctgcccgagggccac
tacagcgccccggccgaggacctcaacgccctcgaccccaaggtctgggcgcgtaccgtc
cgccgcgacgaggacggtgtgctgaccgtcggcggtctgccggtcacccgcctcgccgag
gagttcggcacccccgccttcttcctggacgagaccgacttccgggcccgctgccgcgcc
tggcgcgacgccttcggcgccgaggccgacgtcttctacgcgggcaaggcgttcctctcc
cgcgccgtcgtccgctggctgcacgaggaggggctcaacctcgacgtctgctccggcggc
gagctggccaccgcgctggacgccgggatgccggccgcccggatcgccttccacggcaac
aacaagaccaccgccgagatccgccgggccgtcgaggcgggcgtcgggcggatcgtgctc
gactccttcgaggagatcgtccgcgtcgcgcacgtcgccgacgagctgggcgtgcgccag
ccggtgcagatccgcgtcaccgtcggcgtcgaggcgcacacccacgagttcatcgccacc
gcccacgaggaccagaagttcggcctcgcgctcgccggcggccaggccgccgaggcggtc
cgccgggcgctgaagctggacggtcttgagctgatcggcatccactcgcacatcggctcg
cagatcttcgacatggccggcttcgaggtctccgcccgccgcgtcgtgcagctgctcgcc
gaggtccgcgacgagcacggcgtcgagctgcccgagatcgacctcggcggcggcctcggc
atcgcgtacacctcggacgatgacccgcgggagccgcacgagatcgccaaggcgctcggc
gagatcgtgacccgcgagtgcgagtccgccgggctcgccaccccgcgcatctcggtcgag
ccgggccgtgcgatcgtcgggccgacggccttcacgctgtacgaggtggggaccgtcaag
ccgctggaggggctgcggacgtacgtctcggtcgacggcgggatgtcggacaacatccgc
accgcgctctacgacgccgagtacaccgtgacgctcgcctcgcgcacctccgacgccgag
ccgatgctggtgcgggtggtcggcaagcactgtgagagtggcgacatcgtggtgcgggac
gcgttcctccccgcggacctcgccccgggcgacctgctcgccgtaccggccaccggggcg
tactgccgctccatggccagcaactacaaccacgcgctgcggccgccggtggtggccgtg
gacgagggttcggcgcgggttgtcgtgcgccgggagacggaggaggatctcctgcgtctc
gatgtcgggtga
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