Streptomyces koyangensis: D0C37_11595
Help
Entry
D0C37_11595 CDS
T06436
Name
(GenBank) RNA polymerase sigma factor SigF
KO
K03090
RNA polymerase sigma-B factor
Organism
sky
Streptomyces koyangensis
Brite
KEGG Orthology (KO) [BR:
sky00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
sky03021
]
D0C37_11595
Transcription machinery [BR:
sky03021
]
Prokaryotic type
Bacterial type
RNA polymerase
Sigma factors
D0C37_11595
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Sigma70_r4
Sigma70_r3
Sigma70_r2
Sigma70_r4_2
HTH_Crp_2
HTH_23
HTH_24
HTH_AsnC-type
MarR_2
HTH_3
HTH_31
MarR
HTH_37
DUF7343
Sigma70_ECF
Motif
Other DBs
NCBI-ProteinID:
AXQ55180
UniProt:
A0A385DB36
LinkDB
All DBs
Position
2748024..2749013
Genome browser
AA seq
329 aa
AA seq
DB search
MEDIMSPQLDAQTRLTASTAPLAHLSADGAGETQETREDSPVALSAADDLPYDDPGHELP
ALLADLPEIPPYDEVGPLDARALSKTLFARLETLTEGTAEFAYVRNTLVELNLALVKFAA
SRFRSRSEPMEDIIQVGTIGLIKAIDRFELSRGVEFPTFAMPTIIGEIKRFFRDTSWSVR
VPRRLQELRLDLAKAGDELAQKLDRAPTVRELADRLGLSQEEVVEGMAASNAYTASSLDA
QPEEDDSEGALADRIGYEDHGIEGIEYVESLKPLIAELPARDRRILSLRFTANMTQSEIG
EELGISQMHVSRLLTRTLNRLRKGLTVVE
NT seq
990 nt
NT seq
+upstream
nt +downstream
nt
atggaggacatcatgtcaccccagctcgacgcgcagacccgcctgacggcgtcgaccgcc
ccactcgcacacctgtccgccgacggcgcaggggaaacccaggaaacgcgcgaggactcc
ccggtggcgctctccgccgccgacgacctcccctatgacgatccgggccacgagctcccg
gctctcctcgcggacctgccggagatccccccgtacgacgaggtggggccgctggacgcc
cgcgccctctccaagactctcttcgcccggctggagacgctgacggagggcaccgcggag
ttcgcctacgtacggaacaccctggtcgagctgaacctcgccctggtgaagttcgccgcc
tcccgcttccgctcccgcagcgaaccgatggaggacatcatccaggtcggcacgatcggc
ctgatcaaggcgatcgaccggttcgagctgagccgcggcgtggagttccccacgttcgcc
atgccgacgatcatcggcgagatcaagcggttcttccgagacacctcctggtcggtgcgg
gtcccgcgccgcctccaggagctgcgcctggacctggcgaaggccggggacgagctggcg
cagaagctggaccgcgcgccgaccgtgcgcgagctggccgaccgcctgggcctgagccag
gaggaggtcgtcgaggggatggcggcgtccaacgcgtacaccgccagttcgctcgacgcc
cagcccgaggaggacgactccgagggcgcgctggccgaccgcatcggctacgaggaccac
ggcatcgagggcatcgagtacgtcgagtccctcaagccgctcatcgcggagctgcccgcc
cgcgaccgccgcatcctctcgctgcgcttcaccgccaacatgacgcagtcggagatcggc
gaggagctggggatctcccagatgcacgtctcccgtctgctgacccgcacgctgaaccgg
ctgcgcaaggggctgacggtcgtggagtga
DBGET
integrated database retrieval system
