Streptomyces koyangensis: D0C37_11615
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Entry
D0C37_11615 CDS
T06436
Name
(GenBank) diaminopimelate decarboxylase
KO
K01586
diaminopimelate decarboxylase [EC:
4.1.1.20
]
Organism
sky
Streptomyces koyangensis
Pathway
sky00300
Lysine biosynthesis
sky00470
D-Amino acid metabolism
sky01100
Metabolic pathways
sky01110
Biosynthesis of secondary metabolites
sky01120
Microbial metabolism in diverse environments
sky01230
Biosynthesis of amino acids
Module
sky_M00016
Lysine biosynthesis, succinyl-DAP pathway, aspartate => lysine
Brite
KEGG Orthology (KO) [BR:
sky00001
]
09100 Metabolism
09105 Amino acid metabolism
00300 Lysine biosynthesis
D0C37_11615
09106 Metabolism of other amino acids
00470 D-Amino acid metabolism
D0C37_11615
Enzymes [BR:
sky01000
]
4. Lyases
4.1 Carbon-carbon lyases
4.1.1 Carboxy-lyases
4.1.1.20 diaminopimelate decarboxylase
D0C37_11615
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Paralog
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GFIT
Motif
Pfam:
Orn_Arg_deC_N
Orn_DAP_Arg_deC
SAP25
Motif
Other DBs
NCBI-ProteinID:
AXQ55184
UniProt:
A0A385DBA5
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All DBs
Position
2753205..2754623
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AA seq
472 aa
AA seq
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MGDHRNDLSHLPDSAYADADEPGVRAARRDRAVRAAVAQGLVGPDEPIAGLLDVEGIRAT
AAALHAAFDAVTAPGTPVLHAFAVKATPLVPVLRLLAEAGLGAEVASPGELALATAAGIP
PGRIVLDSPAKTPAEIREALRLGIALNADNPQELERLDAILDGTTPSSPVGVRVNPQVGG
GSIGALSTATPTSKFGVALRDPGARDWVLNAYAARPWLTRLHAHSGSQGMPLELLAEGLR
ALYELAEEINEAAGRKQIDTLDIGGGLPVNFHSDADDPSHASYAALLKETVPGLFDGRYG
LVTEFGRSVLAKHGTVLARVEYTKSAGERPIAVTHAGVQVATRTVYNPESWPLRIAAFDA
EGRPRTGDTVVQDVAGPACFAGDLLATGQTMPRLHPGDWAAALDTGAYYFAHHYAYNSLP
RPAVHGWTERRGAAGEEPEVRFATVRPAQTVAEIVAEGGKTHRDGLTGLADL
NT seq
1419 nt
NT seq
+upstream
nt +downstream
nt
atgggtgatcaccgaaacgacctcagccacctcccggacagcgcctacgccgacgccgat
gagcccggcgtccgcgccgcccgccgcgaccgggccgtccgcgccgccgtcgcccagggc
ctggtcggcccggacgagccgatcgccggactcctcgacgtcgagggcatccgcgccacc
gccgccgccctgcacgcggccttcgacgccgtgaccgcccccggcaccccggtcctgcac
gccttcgccgtcaaggccaccccgctggtaccggtactgcggctcctcgccgaggcggga
ctgggcgccgaggtcgcctcccccggcgaactcgccctcgccaccgccgccggcatcccg
ccgggccgcatcgtcctcgactcccccgccaagacccccgccgagatccgcgaggcgctg
cgcctgggcatcgccctcaacgccgacaacccacaggaactggaacgcctcgacgccatc
ctcgacggcaccaccccctcctcccccgtcggcgtacgcgtcaacccgcaggtcggcggc
ggctccatcggcgccctctccaccgccacccccacctccaagttcggcgtggcgctccgc
gatccgggcgcccgcgactgggtcctgaacgcctacgccgcccgcccctggctcacccgg
ctgcacgcccactccggctcgcaggggatgccgctggaactcctcgcggaagggctgcgc
gccctctacgagctggccgaggagatcaacgaggcggccgggcgcaagcagatcgacacc
ctcgacatcggcggcggcctccccgtcaacttccactccgacgcggacgacccgagccac
gcctcctacgccgccctgctgaaggagaccgtgcccggcctcttcgacgggcggtacggc
ctggtcaccgagttcggccgctcggtgctggccaagcacggcacggtcctggcccgggtc
gagtacaccaagtcggccggtgagcgcccgatcgccgtcacccacgccggggtccaggtc
gccacccgcaccgtctacaaccccgagtcctggccgctacggatcgccgccttcgacgcc
gagggccgcccgcgcaccggtgacaccgtcgtccaggacgtggcagggcccgcctgcttc
gccggggacctgctcgccaccgggcagaccatgccgcggctgcacccgggcgactgggcg
gcggccctggacaccggggcgtactacttcgcccaccactacgcgtacaacagcctgccg
cggccggccgtgcacggctggacggagcggcggggcgcggcgggtgaggagccggaggtg
cggttcgcgacggtgcggccggcgcagaccgtggccgagatcgtcgccgagggcggcaag
acccaccgggacggcctcaccggcctggcggatctctga
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