Streptomyces koyangensis: D0C37_16880
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Entry
D0C37_16880 CDS
T06436
Name
(GenBank) PAS domain-containing protein
Organism
sky
Streptomyces koyangensis
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
PAS
PAS_9
PAS_4
PAS_8
Diguanyl_cycl_sensor
Response_reg
HisKA
PDE8A_N
Motif
Other DBs
NCBI-ProteinID:
AXQ58997
UniProt:
A0A385DMR3
LinkDB
All DBs
Position
complement(3861586..3866919)
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AA seq
1777 aa
AA seq
DB search
MLDALPDALVLVNCNGTVVNANTIALERLEAPGTALVGRGLLDLLPEFDSRLIPGSMRRP
DTIDEQGRTRPTRMTARRTDGAEFPVEVTSASLAEGREPGWGAPSQFGTGAADQRYTGDE
LLMIVVRDLSGAVDTEAELARSQRQTEMILRAAAEGVVGTDTDGRVVLVNPAAAQILGFR
AGDLGGREFHTLVLHSRADGEPFPYAESPLADTLRSGRKHRVRGQVLWAKDGSPVPVDLT
TAPVRDGDQLVGAVVTFTDRRAHEALVAEHAEEQAAAEKRYEELAEREQRRYEELETSST
EKYEKLERTSRERYEELERTSTEKYQELERTSRERYETLERESTERYEALAEREKERYAA
LGEREKDRYEALAARHDQLVAVLSDSLRGPLDHLRSELGSLAADPAGQLWPEANQILHHL
SAGYARMTTLVDNVLGYQRLDAGQDTLDRKKVLLDEVIAAGVEGAVELIGPGRAQFAVHA
PSIEAEIDPHRFATALAHLIADVAGIDATGNARQTPQAMAGGYIDSTVVVAAALRGNAVR
IEVRGPFAGGDPVHEPLVRGIVRAHGGVLQTHAMPGMSGSAYVLDVPLGEGAGAVQAPPQ
AELPAGGTPEQAPEGTAPDAESERPHGRRRRRAAPRSSVDSFLGASADGTPATPEPAPAA
APTGRRRGRRAADETPVEAVLAGQDGGETPAAGSAVALPAPTGAAEGGTGRRRRRAAAPQ
DENAPTSEGAVTTAAEHAAGTAASASALGGTVPPQGVPPAGLRAAQPALPPAGSDAPGAA
VVIAPGVRPGLTAAVPRPAQAPDDQQGRAVQRPAPSAMPALPPAGALAPAQPTPPGTPNT
PSAPAAPAPAVGTPGETVQAMPSAQPNSAPAPGQAAPQAALAPVAPPFAPPAGPTAASTG
TAVPAQPTPQPGVPNPAAAPAPAPGPAPVPPVTAAPGVPVPPAPAAPGTAVSPVTPPQAP
AVQAPPAEAQAPAANPATPDRPAAPTAQGAAVPGMPPAPGFPQPATPQAPVPPGFPAGAG
QPVQPGQPAPQPPTAGPLTPPFAVGQALQAPVPGSPVPPATPAAGQAAPVPGAVPAPDPA
AVRPQHPLAPSQLPAAPQGGPASSMPLPPATGTPTAPGAPAAPAPGTPGAPVGQQTPPAG
LPAQQPAAQPGVPGQQPVVPPVQVPPGAAYPAAPVAQQPLPAQALPGQQAAGPRRARRAL
ADGPGQVPGEAGEAGTGLALPSAEDAHGPAGHPALDHTPPQAHPLPTASAPLPEATPAGG
TPVSPPAADGWAVPTAATGSVPLPEAAPPAEAQEQEQTTGPQTGDVPGLQAGPEAVSRET
SPVATPGGEAPVSRETSGETPVAPVSRETSTEDPAAPVSRETSAVAPAPAPQPQRVAQPL
PAESAEQQAASAQNRAFSVRTLGQGVPFAAPGRPAEPQRRPLNNPAQPPQNPPPPAPATA
GRRRKLGTPPAAEESATPPAPQQAAPQAPPQQATPVPGAPVPAAAPAPEADGYPAQGRSY
AIGAPDEGAEGPEPLDGPNGAVEVANQPQPQPQDAELPPEPLDNPRRLLVWPAPDVSTQQ
ALSDRGYRPVIVHSREEVDAQIAAFPAALFVDPLTGPITRTALQSLRQAAVAAEVPVLVT
AGLGQATREAAYGADPAVLLKALAARDSEQHPSRVLLIEEREEIALALTAALERRGMQVA
RATTDTDAVNLATQMHPNLVVMDLMQVRRRRAGVVDWLRANGRLNHTPLVVYTAAGIDPA
ELPRLASGETVLFLAERSTTDDVQARIVDLLAKIGTN
NT seq
5334 nt
NT seq
+upstream
nt +downstream
nt
atactcgacgcgctccccgacgccctggtgctcgtcaactgcaacggcacggtcgtcaac
gccaacaccatcgcgctggagcgcctggaggcgcccggtacggcgctggtcgggcgcgga
ctgctcgatctgctcccggagttcgactcgcggctgatccccggatcgatgcgccgcccg
gacaccatcgacgagcagggccgcaccaggccgacgcggatgacggcccggcggaccgac
ggcgccgagttccccgtcgaggtgaccagcgcgagtctcgccgaggggcgggagcccggc
tggggtgctccctcgcagttcggcaccggggcggcggaccagcggtacaccggcgacgaa
ctgctgatgatcgtggtccgggacctctccggggccgtcgacaccgaggcggagctggcc
cgttcgcagcggcagaccgagatgatcctgcgggctgcggccgagggcgtcgtcggcacc
gacaccgacgggcgcgtcgtcctggtcaacccggcggcggcgcagatcctcggcttccgc
gccggagatctgggcggccgcgagttccacacgctggtcctgcactcgcgggccgacggc
gagcccttcccgtacgccgagtcgccgctcgccgacacgctgcgctccgggcgcaagcac
cgggtgcgggggcaggtgctgtgggccaaggacggctcgccggtgccggtcgacctcacc
accgcgcccgtgcgcgacggggaccagctggtcggtgccgtcgtcaccttcaccgaccgg
cgcgcccacgaggcgctcgtcgccgagcacgccgaggagcaggccgccgccgagaagcgc
tacgaggagctggccgagcgcgaacagcggcggtacgaggagctggagacctcctcgacc
gagaagtacgagaagctggaacgcacttcgcgcgagcggtacgaggagctggaacgcacc
tccaccgagaagtaccaggagctggagcgcacctcccgcgagcggtacgagacgctggaa
cgcgagtccaccgagcggtacgaggcgctggcggagcgggagaaggagcggtacgcggcc
ctcggcgagcgggagaaggaccgctacgaggcgctggccgcccgccacgaccagctggtc
gcggtgctctccgactcgctgcgcggccccctcgaccacctgcggagcgagctgggttcg
ctcgccgccgacccggcgggccagctctggcccgaggccaaccagatcctgcaccacctc
tccgccggctacgcgcggatgacaaccctcgtcgacaacgtcctcggctaccagcggctc
gatgccgggcaggacaccctggaccgcaagaaggtgctgctcgacgaggtcatcgcggcc
ggcgtcgagggcgccgtcgagctgatcggcccgggccgggcgcagttcgccgtgcacgcc
ccgtccatcgaggcggagatcgacccgcaccgcttcgccacggcgctggcccacctcatc
gccgacgtggccggcatcgacgccaccggcaacgcccggcagaccccgcaggccatggcc
ggcgggtacatcgactccacggtcgtcgtcgcggcggccctgcgcggcaacgcggtacgc
atcgaggtgcgcggcccgttcgcgggcggcgacccggtgcacgagccgctcgtacgcggc
atcgtccgggcccacggcggcgtcctccagacccacgccatgcccggcatgagcggcagc
gcctacgtcctggacgtccccctcggcgagggcgccggggcggtccaggcaccgccgcag
gccgaactgcccgccggtgggacgcccgagcaggcacccgagggcaccgccccggacgcc
gagtccgagcggccgcacgggcggcggcgccggcgtgccgcgccgcgctcctcggtcgac
tccttcctcggggcctccgccgacggcaccccggccacgcccgaacccgcccccgcggcc
gcccccaccgggcgccgccgtggtcgccgggcggccgacgagacgccggtcgaggccgta
ctggccgggcaggacggcggcgagaccccggccgccggcagcgcggtcgcgctgcccgcg
cccaccggcgcggccgagggcggcaccgggcgcaggcgccgccgcgccgccgcgccccag
gacgagaacgccccgacctccgagggcgcggtgaccaccgcggccgagcacgccgccggt
accgcggcctccgccagcgctctggggggaacggtgcctccgcagggggtgcccccggcc
gggctccgcgccgcccagcccgcgctgccgcccgccggttccgacgccccgggtgcggcc
gtcgtcatcgccccgggagtccgccccgggctcaccgccgccgtgccgcgccccgcgcag
gcccccgacgaccagcagggccgcgccgtccagcgccccgcgccctccgccatgcccgcg
ctgccgcctgccggagccctcgctcccgcccagccgacaccgcccggcacgccgaacacc
ccgtcggcgcccgccgctccggcccccgcggtgggcaccccgggcgagacggtccaggcg
atgccctccgcgcagccgaacagcgcgcccgcccccggccaggcagccccccaggcggcc
ctcgctcccgtggccccgccgttcgcgccgcccgccggcccgaccgccgcctccaccggg
accgcggtccccgcgcagccgaccccgcagccaggcgtcccgaacccggccgcggcgccc
gccccggctccgggcccggctcccgtcccgccggtcacggccgcccccggcgtcccggta
ccgcccgctccggcagcccccggcaccgccgtgagccctgtgactccgccgcaggcaccc
gccgttcaggcgcctcccgccgaggctcaggccccggcggcgaaccccgcgaccccggac
cggcccgccgctccgaccgcgcagggtgcggccgtccccggcatgcctccggcgccgggg
ttcccgcagcccgccaccccgcaggctccggtcccgcccggtttcccggcgggtgcgggc
cagccggtccagcccgggcagcccgccccccagccccccactgccggcccgttgacgccg
ccgttcgccgtcggccaggcgctccaggcccccgtgccgggctcgccggtgccgccggcc
acgcccgcggcggggcaggcggcaccggttcccggcgccgtccccgctccggacccggcg
gccgtgcggccgcagcacccgctcgccccgtcgcagctccctgccgcgccgcagggcggc
cccgcctcttccatgccgctcccgcccgcgacgggcacgcccacggccccgggggcgccg
gcagctccggcgccgggcacccctggcgcgcccgtggggcagcagaccccgcccgccggg
ctcccggcccagcagcccgccgcccagccgggcgtgcccggtcagcagccggtcgttccg
ccggtccaggttccgcccggcgccgcgtacccagcggctcccgtggctcagcagccgctg
cccgcgcaggcgttgcccgggcagcaggcggcgggaccccggcgggcgcgccgtgccctc
gccgacgggcccgggcaggtgccgggcgaggcgggggaggccgggaccggcctggccctt
ccctcggcggaggacgcgcacgggccggcgggtcaccccgcgctcgaccacaccccgccg
caggcgcacccgctgccgaccgcctcggctccgctgccggaggcgacgccggccgggggg
acgccggtctccccgcccgcggccgacggctgggccgtgcccacggcggcgaccggctcc
gtgcccctccccgaggcggctccgcccgccgaggcgcaggagcaggagcagaccaccggg
ccgcagacgggggacgtgcccgggctccaggcggggcctgaggcggtttcacgtgaaaca
tcgcccgtcgcgacacctggcggcgaggcgcccgtttcacgtgaaacatccggcgagact
ccggtcgcccctgtttcacgtgaaacatcgaccgaagacccggctgctcctgtttcacgt
gaaacatccgcagtcgctccggccccggccccgcagccgcagcgcgtggcccagccgctc
ccggccgagtccgccgagcagcaggccgcctccgcgcagaaccgggcgttcagcgtgcgc
accctcggccagggggtgcccttcgcggcgcccggccgtccggccgagccgcagcgccgg
ccgctgaacaacccggcccagccgccgcagaacccgccgcccccggccccggccacggcc
gggcgccgacggaagctggggacgcccccggcggcggaggagtccgcgacgccgcccgcg
ccgcagcaggccgccccgcaggcgccgccccagcaggcaactcccgtgcccggcgcgccc
gtaccggcggcggcgcccgcgcccgaggccgacggctatcccgcacagggccggtcgtac
gcgataggcgcgcccgacgagggggccgaggggccggagccgctggacgggcccaacggc
gccgtcgaggtggccaaccagccgcagcctcagccgcaggacgccgagctgccgcccgag
ccgctcgacaacccccggcgtctgctggtctggccggcgcccgacgtctccacccagcag
gcgctcagcgaccgtgggtaccgtccggtgatcgtgcactcccgggaggaggtggacgcg
cagatcgccgccttcccggccgcgctcttcgtggacccgctgaccgggccgatcacccgg
accgccctccagtcgctgcgccaggccgcggtggccgccgaggtcccggtcctggtgacc
gcggggctcgggcaggcgacgcgcgaggcggcgtacggtgccgatccggcggtgctcctc
aaggcgctggccgcgcgcgacagcgagcagcacccctcgcgggtcctgctcatcgaggag
cgcgaggagatcgcgctggcgctgacggccgcgctggagcgccggggcatgcaggtcgcc
cgggccaccaccgacaccgacgcggtcaacctggccacccagatgcaccccaacctcgtg
gtgatggacctgatgcaggtccgccgccgccgggccggggtggtggactggctgcgggcc
aacgggcggctcaaccacaccccgctggtcgtctacacggccgccgggatcgacccggcg
gagctgccgaggctcgcctccggggagaccgtcctcttcctggccgagcggtcgaccacc
gacgacgtccaggcccggatcgtcgacctgctggcgaagatcggcaccaactga
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