Streptomyces koyangensis: D0C37_16955
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Entry
D0C37_16955 CDS
T06436
Name
(GenBank) RNA polymerase sigma factor SigF
KO
K03090
RNA polymerase sigma-B factor
Organism
sky
Streptomyces koyangensis
Brite
KEGG Orthology (KO) [BR:
sky00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
sky03021
]
D0C37_16955
Transcription machinery [BR:
sky03021
]
Prokaryotic type
Bacterial type
RNA polymerase
Sigma factors
D0C37_16955
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Sigma70_r4
Sigma70_r2
Sigma70_r3
Sigma70_r4_2
HTH_23
HTH_Crp_2
HTH_3
Sigma70_ECF
HTH_31
HTH_24
MarR
DUF7343
Motif
Other DBs
NCBI-ProteinID:
AXQ56131
UniProt:
A0A385DE68
LinkDB
All DBs
Position
complement(3880066..3881088)
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AA seq
340 aa
AA seq
DB search
MSAEQGSSKVLTLSKSAPGVLDRAEFPHGLPPETTRQEDALRPTVPAQAGHPAGPPGAAD
TVTPLPETDEAAPADLPEPSGALDTRTLSRSLFLRLRELAAEDSGGQDSPERAYVRDTLI
ELNLPLVRYAAARFRSRNEPMEDIVQVGTIGLIKAIDRFDCERGVEFPTFAMPTVIGEIK
RFFRDTSWSVRVPRRLQELRLALTKTSDELAQKLDRSPTVPELAHALGVSEEDVVDGLAV
GNAYTASSLDSPAPEDDGGEGSLADRLGYEDTALEGVEYRESLKPLLAKLPPRERRIIML
RFFANMTQSQIGEEVGISQMHVSRLLTRTLAQLREGLIAD
NT seq
1023 nt
NT seq
+upstream
nt +downstream
nt
atgtccgcagaacagggcagctcgaaggtgctcacgctcagcaagagtgcccccggtgtg
ctcgaccgtgcggaattcccgcatggcctgccgccggagacgacccgtcaggaagacgcg
ctccggcccacggtcccggcgcaggccggccacccggccgggccccccggcgccgcggac
acggtcacgccgctcccggagaccgacgaggcggccccggccgacctccccgagccctcg
ggcgcgctcgacacgcgcaccctctcccgctccctcttcctgcgcctgcgggagctggcg
gcggaggactccggcggccaggacagccccgagcgggcctacgtccgcgacaccctcatc
gagctgaacctccccctcgtccggtacgcggcggcccgcttccgcagccggaacgagccg
atggaggacatcgtccaggtcggcacgatcggcctgatcaaggcgatcgaccggttcgac
tgcgagcgcggggtggagttcccgaccttcgcgatgccgacggtgatcggcgagatcaag
cggttcttccgcgacaccagctggtcggtgcgggtcccgcgccgcctccaggagctgcgg
ctggcgctcaccaagaccagcgacgagctggcccagaagctcgaccgctccccgaccgtg
cccgagctggcccacgcgctcggcgtctcggaggaggacgtcgtcgacggcctcgccgtg
ggcaacgcctacaccgcctcctcgctcgactccccggcccccgaggacgacggcggcgag
ggctccctcgcggaccgcctggggtacgaggacacggcgctggagggcgtggagtaccgc
gagtcgctcaagcccctgctggccaagctgccaccgcgcgagcgccggatcatcatgctc
cgcttcttcgccaacatgacccagtcgcagatcggcgaggaggtcggcatctcccagatg
cacgtctcccgcctcctcacccgcaccctggcccagctccgcgagggcctgatcgcggac
tga
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