Streptomyces koyangensis: D0C37_19875
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Entry
D0C37_19875 CDS
T06436
Symbol
recQ
Name
(GenBank) DNA helicase RecQ
KO
K03654
ATP-dependent DNA helicase RecQ [EC:
5.6.2.4
]
Organism
sky
Streptomyces koyangensis
Pathway
sky03018
RNA degradation
Brite
KEGG Orthology (KO) [BR:
sky00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
03018 RNA degradation
D0C37_19875 (recQ)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
sky03019
]
D0C37_19875 (recQ)
03400 DNA repair and recombination proteins [BR:
sky03400
]
D0C37_19875 (recQ)
Enzymes [BR:
sky01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.4 DNA 3'-5' helicase
D0C37_19875 (recQ)
Messenger RNA biogenesis [BR:
sky03019
]
Prokaryotic type
Bacterial mRNA degradation factors
RNA degradosome components
Helicases
D0C37_19875 (recQ)
DNA repair and recombination proteins [BR:
sky03400
]
Prokaryotic type
DSBR (double strand breaks repair)
NHEJ (non-homologous end-joining)
SHDIR (short-homology-dependent illegitimate recombination)
Supressor
D0C37_19875 (recQ)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RQC
HRDC
DEAD
RecQ_Zn_bind
Helicase_C
Motif
Other DBs
NCBI-ProteinID:
AXQ56625
UniProt:
A0A385DDX6
LinkDB
All DBs
Position
4476610..4478691
Genome browser
AA seq
693 aa
AA seq
DB search
MASTSTDGGTPAYDGPEGFPDDLFDGAPPEEDPFGDEPFPDEAFPEDGAREELSGAFPEG
SGEAPVHVRRDALATLRSVFGYDAFRGDQEAVIDHLVGGGDAVVLMPTGGGKSLCYQIPA
MVRPGTGVVVSPLIALMQDQVDALRAAGVRAGFINSTQDFEERRLTEAEFLAGELDLLYL
APERLRVDTTLQLLSRGRISLFAIDEAHCVAQWGHDFRPDYLALSVLGERWPDVPRVALT
ATATDATHQEITRRLALPDAKHFVASFDRPNIQYRIVPKNDPKKQLLTFLKEEHPGDAGI
VYCLSRNSVERTADFLRDHGVEAVPYHAGLDARTRATNQSRFLREDGLVVVATIAFGMGI
DKPDVRFVAHLDLPKSVEGYYQETGRAGRDGRPSTAWMAYGLQDVVQQRKLIQSGEGDEA
HRRRSQSHLDAMLALCETAQCRRAQLLRYFGQEPTGENCGNCDTCLTPPETWDGTVAAQK
AMSTVVRLKRERNQKFGTGQIIDILMGRKTAKVIQFDHDQLSVFGVGQELSEGEWRGAVR
QLLAQGLLAVEGEYGTLVLTDEAGEVLGGRREVHFRKEPKKAPSSRGSRSGSAAGSGGRK
SKAVIDLPEESLPVFEALRAWRAAQAREQGVPAYVIFHDATLREITAARPTTLDALGQIG
GIGDKKLQNYGPGVLETLAEQGIGEDPDSRVGA
NT seq
2082 nt
NT seq
+upstream
nt +downstream
nt
atggcgagcaccagcacggacggcggcacccccgcgtacgacgggcccgagggcttcccc
gacgacctcttcgacggcgctcccccggaggaggacccgttcggcgacgaacccttcccg
gacgaggcgttccccgaggacggtgcccgtgaggagctctccggcgcctttcccgaggga
agtggcgaggccccggtccacgtccgccgggacgcgctcgccaccctgcgctccgtcttc
gggtacgacgcgttccgcggcgaccaggaagccgtcatcgaccacctggtcggcggcggc
gacgcggtcgtcctcatgcccaccggcggcggcaagtccctctgctaccagatcccggcc
atggtccgccccggcaccggcgtcgtcgtctccccgctgatcgccctcatgcaggaccag
gtggacgccctgcgcgcggccggcgtccgcgccgggttcatcaactccacccaggacttc
gaggagcgccgcctcaccgaggccgagttcctcgccggcgaactggacctgctctacctc
gcccccgagcgcctgcgggtcgacaccacgctgcaacttctctcgcgcggcagaatctcc
ctcttcgccatcgacgaggcgcactgcgtcgcccagtggggccacgacttccgccccgac
tacctggccctctccgtcctcggcgagcgctggccggacgtcccccgggtcgccctcacc
gccaccgcgaccgacgccacccaccaggagatcacccgccggctcgcgctgcccgacgcc
aagcacttcgtcgccagcttcgaccggcccaacatccagtaccggatcgtccccaagaac
gacccgaagaagcagctcctcaccttcctcaaggaggagcaccccggcgacgcgggcatc
gtctactgcctctcgcgcaactccgtcgagcgcaccgccgacttcctccgcgaccacggc
gtcgaggccgtcccttaccacgcggggctcgacgcgcggacccgcgccaccaaccagtcc
cggttcctgcgcgaggacggcctggtcgtcgtcgccaccatcgccttcggcatgggcatc
gacaagcccgacgtccgcttcgtcgcccacctcgacctgccgaagtcggtcgaggggtac
taccaggagaccgggcgcgcgggccgcgacggccgcccctccacggcctggatggcgtac
ggcctccaggacgtcgtgcagcagcgcaagctcatccagtcgggcgagggggacgaggcg
caccggcgccgctcccagtcccacctggacgcgatgctcgccctctgcgagaccgcccag
tgccgccgcgcccagctgctccgctacttcggccaggagcccaccggcgagaactgcggc
aactgcgacacctgcctgaccccgccggagacctgggacggcacggtcgccgcccagaag
gccatgtccaccgtggtccggctcaagcgcgagcggaaccagaagttcggcaccggccag
atcatcgacatcctgatgggccgcaagacggccaaggtcatccagttcgaccacgaccag
ctctccgtcttcggcgtcggccaggagctgagcgagggcgagtggcgcggggccgtgcgc
cagctcctggcccagggactgctggccgtcgagggcgagtacggcacgctggtcctcacc
gacgaggcgggcgaggtgctgggcggccgccgcgaggtccacttccgcaaggagcccaag
aaggcaccctcgtcccggggcagccggtccggctcggccgcaggctcgggcggccgcaag
agcaaggccgtcatcgacctccccgaagaatccctgcccgtcttcgaggccctccgcgcc
tggcgcgccgcccaggccagggagcagggcgtccccgcctacgtgatcttccacgacgcc
accctccgcgagatcaccgccgcccgccccaccaccctcgacgccctcggccagatcggc
ggcatcggcgacaagaaactccagaactacggcccgggggtcctggaaaccttggcggag
cagggaatcggggaagaccccgacagcagggttggcgcttga
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