Streptomyces koyangensis: D0C37_20940
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Entry
D0C37_20940 CDS
T06436
Symbol
pcrA
Name
(GenBank) DNA helicase PcrA
KO
K03657
ATP-dependent DNA helicase UvrD/PcrA [EC:
5.6.2.4
]
Organism
sky
Streptomyces koyangensis
Pathway
sky03420
Nucleotide excision repair
sky03430
Mismatch repair
Brite
KEGG Orthology (KO) [BR:
sky00001
]
09120 Genetic Information Processing
09124 Replication and repair
03420 Nucleotide excision repair
D0C37_20940 (pcrA)
03430 Mismatch repair
D0C37_20940 (pcrA)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
sky03400
]
D0C37_20940 (pcrA)
Enzymes [BR:
sky01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.4 DNA 3'-5' helicase
D0C37_20940 (pcrA)
DNA repair and recombination proteins [BR:
sky03400
]
Prokaryotic type
SSBR (single strand breaks repair)
NER (nucleotide excision repair)
GGR (global genome repair) factors
D0C37_20940 (pcrA)
MMR (mismatch excision repair)
Other MMR factors
D0C37_20940 (pcrA)
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
UvrD-helicase
UvrD_C
AAA_19
PcrA_UvrD_tudor
UvrD_C_2
AAA_30
AAA_11
ResIII
DEAD
CarD_TRCF_RID
Motif
Other DBs
NCBI-ProteinID:
AXQ56818
LinkDB
All DBs
Position
4678784..4681306
Genome browser
AA seq
840 aa
AA seq
DB search
MSSLFDDSFLADLQSSAPSARLGDEPPPPPEEEAPEEIPADLFGGKFDAPADRDAYYRDG
APRPAVDPAALLDGLNDEQRAAVVHSGSPLLIVAGAGSGKTRVLTHRIAHLLGERGVHPG
QILAITFTNKAAGEMKERVEELVGPRANAMWVSTFHSACVRILRRESKHLGFTSSFSIYD
AADSKRLMALVCRDLDLDPKRYPPKSFTAKVSNLKNELVDPEDFAAQAADGFEKTLAQAY
TMYQSRLREANALDFDDIIMTTVHLLQAFPDVADHYRRRFRHVLVDEYQDTNHAQYSLVR
ELVGTPADRPADVPEGAESDHDPLHPAPEPAELCVVGDADQSIYAFRGATIRNILQFEED
YPNATTILLERNYRSTQTILTAANAVIERNENRRPKNLWTDAGAGAGITGYVADTEHDEA
QFVAEEIDRLTDAGDAKAGDIAVFYRTNAQSRVFEEIFIRVGLPYKVVGGVRFYERKEVR
DVLAYLRVLANPEDSVSLRRILNTPKRGIGDRAEAMIDALSQRERVSFPQALRRVDEAYG
MAARSANAVKRFNTLMEELRTVVESGAGPATVLEAVMERTGYLAELQASTDPQDETRIEN
LQELAAVALEFEQDRSEEEGAGTLPEFLEQVALVADSDQIPDEDEDGSGVITLMTLHTAK
GLEFPVVFLTGMEDGVFPHMRALGQTKELEEERRLAYVGITRARERLYLTRAAMRSAWGQ
PSYNPPSRFLEEIPEQHLKWKRTGAMGAPAGASPRGPAGSVASSLSSSTRAKGAPAFATR
RAAEQPVVALAVGDRVTHDQFGLGTVVGVKGAGSAAEATVDFGGEKPKRLLLRYAPVEKL
NT seq
2523 nt
NT seq
+upstream
nt +downstream
nt
atgagcagcctctttgacgacagcttcctggccgacctccagtcctcggcgccctccgcc
cggctcggggacgagccgccgcccccgcccgaggaggaggcaccggaggagatcccggcc
gacctgttcggcgggaagttcgacgcgcccgcggaccgggacgcgtactaccgggacggc
gccccgcgtcccgccgtcgacccggccgccctgctcgacgggctcaacgacgagcagcgc
gccgccgtcgtccacagcgggtccccgctgctcatcgtcgccggcgccggttccggcaag
acccgtgtgctcacccaccgcatcgcccacctgctcggcgagcgcggtgtgcacccgggc
cagatcctcgcgatcaccttcaccaacaaggccgcgggcgagatgaaggagcgcgtggag
gagctggtcggcccgcgcgccaacgccatgtgggtctccaccttccacagcgcctgcgtg
cgcatcctgcgccgcgagtcgaagcacctcggcttcacctcgtcgttctcgatctacgac
gcggccgactccaagcggctgatggccctggtctgccgtgacctcgacctcgacccgaag
cgctacccgccgaagtccttcacggccaaggtctcgaacctgaagaacgagctggtcgac
cccgaggacttcgcggcccaggccgccgacgggttcgagaagacgctggcgcaggcgtac
acgatgtaccagtcgcggctgcgcgaagccaacgcgctcgacttcgacgacatcatcatg
accacggtccacctgctccaggccttccccgacgtcgccgaccactaccggcgccgcttc
cggcacgtcctggtcgacgagtaccaggacaccaaccacgcccagtactccctggtcagg
gagttggtcggtacccctgccgaccgtccggcggacgtccccgagggtgccgagtccgac
cacgacccgctccacccggcccccgagccggccgagctgtgcgtggtgggcgacgccgac
cagtcgatctacgccttccgcggcgccaccatccgcaacatcctccagttcgaggaggac
tacccgaacgccaccacgatcctgctggaacggaactaccgctccacccagacgatcctc
accgcggccaacgccgtcatcgagcggaacgagaaccgccgcccgaagaacctctggacc
gacgccggggcgggcgccggcatcaccgggtacgtcgcggacaccgagcacgacgaggcc
cagttcgtcgccgaggagatcgaccggctgaccgacgcgggcgacgccaaggcgggcgac
atcgcggtcttctaccgcaccaacgcccagtcccgtgtcttcgaggagatcttcatccgg
gtcggcctgccctacaaggtcgtcggcggcgtccgcttctacgagcgcaaggaggtccgc
gacgtcctcgcctacctgcgcgtcctcgccaacccggaggacagcgtctccctgcgccgc
atcctcaacacccccaagcgcggcatcggcgaccgcgccgaggcgatgatcgacgccctc
tcgcagcgcgaacgggtcagcttcccgcaggccctgcgccgggtcgacgaggcgtacggc
atggcggcccgctcggccaacgccgtcaagcggttcaacacgctgatggaggagctgcgc
acggtggtcgagtccggtgccgggcccgccaccgtcctggaggcggtcatggagcgcacc
ggctacctcgccgaactccaggcctccaccgacccgcaggacgagacccgcatcgagaac
ctccaggaactggccgccgtggccctggagttcgagcaggaccgcagcgaggaggagggt
gcgggcacgctcccggagttcctggaacaggtcgccctggtcgccgactccgaccagatc
cccgacgaggacgaggacggctccggcgtcatcaccctgatgaccctgcacaccgccaag
ggcctggagttccccgtcgtcttcctcaccggcatggaggacggcgtcttcccgcacatg
cgcgccctcggccagaccaaggagctggaggaggagcgccgcctcgcctacgtgggcatc
acccgggcccgtgagcggctctacctcacccgcgccgccatgcgcagcgcctggggccag
ccctcgtacaacccgccctcccgcttcctggaggagatccccgagcagcacctgaagtgg
aagcggaccggggccatgggcgccccggccggcgcgagcccgcgcggcccggccggttcc
gtggcctcctcgctctcctcctccacccgcgccaagggcgccccggccttcgccacccgg
cgcgccgccgagcagccggtggtcgcgctggccgtcggcgaccgcgtcacccacgaccag
ttcggcctgggcacggtcgtcggcgtcaagggcgcgggctcggccgccgaggccaccgtc
gacttcggcggcgagaagcccaagcggctgctgctgcggtacgcgccggtcgagaagctg
tag
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