Streptomyces koyangensis: D0C37_25965
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Entry
D0C37_25965 CDS
T06436
Name
(GenBank) DNA polymerase III subunit alpha
KO
K02337
DNA polymerase III subunit alpha [EC:
2.7.7.7
]
Organism
sky
Streptomyces koyangensis
Pathway
sky03030
DNA replication
sky03430
Mismatch repair
sky03440
Homologous recombination
Brite
KEGG Orthology (KO) [BR:
sky00001
]
09120 Genetic Information Processing
09124 Replication and repair
03030 DNA replication
D0C37_25965
03430 Mismatch repair
D0C37_25965
03440 Homologous recombination
D0C37_25965
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03032 DNA replication proteins [BR:
sky03032
]
D0C37_25965
03400 DNA repair and recombination proteins [BR:
sky03400
]
D0C37_25965
Enzymes [BR:
sky01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.7 Nucleotidyltransferases
2.7.7.7 DNA-directed DNA polymerase
D0C37_25965
DNA replication proteins [BR:
sky03032
]
Prokaryotic type
DNA Replication Elongation Factors
Elongation factors (bacterial)
DNA polymerase III holoenzyme
D0C37_25965
DNA repair and recombination proteins [BR:
sky03400
]
Prokaryotic type
SSBR (single strand breaks repair)
MMR (mismatch excision repair)
DNA polymerase III holoenzyme
D0C37_25965
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DNA_pol3_alpha
DNA_pol3_finger
PHP
HHH_6
tRNA_anti-codon
DUF655
Tsr1_G-like
HHH_3
Motif
Other DBs
NCBI-ProteinID:
AXQ57698
UniProt:
A0A385DH35
LinkDB
All DBs
Position
5808388..5811936
Genome browser
AA seq
1182 aa
AA seq
DB search
MSATSKPPFTHLHVHTQYSLLDGAARLKDMFDACNEMGMTHIAMSDHGNLHGAYDFFHSA
QKAGVTPIIGIEAYVAPESRRTKRKIQWGQPHQKRDDVSGSGGYTHKTIWAANSTGLHNL
FRLSSDAYSEGWLQKWPRMDKESISQWSEGLIASTGCPSGEVQTRLRLGQEEEALRAAAE
YQEIFGKDRYFLELMDHGIEIERRVRQGLLDIGKKLGIPPLVTNDSHYTYSHESVAHDAL
LCIQTGKNLSDPDRFRFDGTGYYLKSTEEMYAIDSSDAWQEGCRNTLLVAEQIDTTGMFE
KRDLMPKFDIPDGFTEVTWFQEEVRRGMARRFPAGVPEDRQRQAEYEMDVIIQMGFPGYF
LVVADFIMWAKNNGIAVGPGRGSAAGSIVAYAMGITDLDPIEHGLIFERFLNPERVSMPD
VDIDFDERRRVEVIRYVTEKYGADKVAMIGTYGKIKAKNAIKDSARVLGYPYAMGDRLTK
AMPADVLGKGIDLDGITNPKHPRYSEAGEIRGMYENEPDVKKVIDTAKGVEGLVRQMGVH
AAGVIMSSEPIVDHAPLWTRHTDGVTITQWDYPQCESLGLLKMDFLGLRNLTIMDDARKM
VEANKGIDLDLLALPLDDPKTFELLCRGDTLGVFQFDGGPMRSLLRLMKPDNFEDISAVS
ALYRPGPMGMNSHTNYALRKNGQQEITPIHPELEEPLKEILGLTYGLIVYQEQVQKAAQI
IAGYSLGEADILRRVMGKKKPEELAKNFVLFQEGAKKKGFSDEAIQALWDVLVPFAGYAF
NKAHSSAYGLVTYWTAYLKANYPAEYMAALLTSVKDDKDKSAVYLNECRRMKIKVLPPDV
NESVHNFAAQSDDVILFGLEAVRNVGTNVVESIIRARKAKGKFSSFPDYLDKIEAQACNK
RTTESLIKAGAFDALGHTRKGLTAHYEPMIDNVVAVKRKEAEGQFDLFGGMGDESADEPG
FGLDIEFTDEEWDKTYLLAQEREMLGLYVSDHPLFGLEHVLSDKADAGIGQLTGGDFGDG
AVVTVGGIISGLQRKMTKQGNAWAIATVEDLAGSIECMFFPATYQLVSTQLVEDAVVFVK
GRLDKREDIPRLVAMELQVPDLSNAGTNAPVIITIPAVKVTPPMVSRLGEVLDSHRGNSE
VRIKLQGPRKTTVLRLDRHRVQPDPSLFGDLKVLLGASCLAG
NT seq
3549 nt
NT seq
+upstream
nt +downstream
nt
gtgtctgccacgtccaagccgcccttcacgcacctgcacgtccacacgcagtactccctg
ctggacggcgccgcgcggctcaaggacatgttcgacgcgtgcaacgagatgggcatgacc
cacatcgccatgtcggaccacggcaacctccacggcgcgtacgacttcttccacagcgcc
cagaaggcgggggtcacgccgatcatcggcatcgaggcgtacgtggcccccgagtcccgg
cggaccaagcggaagatccagtggggccagccgcaccagaagcgcgacgacgtctcgggc
tccggcggttacacccacaagacgatctgggcggccaactccaccggcctgcacaacctc
ttccggctctcctccgacgcgtactccgagggctggctccagaagtggccgcggatggac
aaggagtcgatctcgcagtggtcggaggggctgatcgcctccaccggctgcccctccggc
gaggtgcagacccggctgcggctgggccaggaggaggaggcgctgcgggccgccgccgag
taccaggagatcttcggcaaggaccggtacttcctggagctgatggaccacggcatcgag
atcgagcgccgggtccgccagggcctgctcgacatcggcaagaagctcggcatccccccg
ctggtcaccaacgactcgcactacacgtactcgcacgagtcggtcgcccacgacgccctg
ctctgcatccagaccggcaagaacctctccgacccggaccgcttccgcttcgacggcacg
ggctactacctgaagtcgacggaggagatgtacgccatcgactcctccgacgcctggcag
gaggggtgccgcaacacgctgctggtcgccgagcagatcgacaccaccggcatgttcgag
aagcgcgacctgatgccgaagttcgacatcccggacggcttcaccgaggtgacctggttc
caggaggaggtccgccgcggcatggcgcgccgcttcccggccggcgtccccgaggaccgc
cagcggcaggccgagtacgagatggacgtcatcatccagatggggttcccggggtacttc
ctcgtcgtcgccgacttcatcatgtgggcgaagaacaacggcatcgcggtcggccccggc
cgaggctccgcggccggttcgatcgtcgcgtacgccatgggcatcaccgacctcgacccg
atcgagcacggcctgatcttcgagcgcttcctcaacccggagcgcgtctccatgcccgat
gtcgacatcgacttcgacgagcgcaggcgcgtcgaggtgatccggtacgtcacggagaag
tacggcgccgacaaggtcgccatgatcggcacctacggcaagatcaaggcgaagaacgcc
atcaaggactcggcccgcgtcctcgggtacccgtacgccatgggcgaccggctcaccaag
gcgatgcccgccgacgtcctcggcaagggcatcgacctcgacggcatcaccaacccgaag
cacccgcgctacagcgaggcgggcgagatccgggggatgtacgagaacgagccggacgtc
aagaaggtcatcgacaccgccaagggcgtcgagggcctggtccggcagatgggtgtgcac
gcggccggcgtgatcatgtccagcgagccgatcgtcgaccacgccccgctgtggacccgg
cacaccgacggcgtcaccatcacgcagtgggactacccgcagtgcgagtcgctcggcctg
ctgaagatggacttcctcggcctgcgcaacctcaccatcatggacgacgcgcggaagatg
gtggaggccaacaagggcatcgacctcgaccttctcgccctgccgctggacgacccgaag
accttcgaactcctctgccgcggtgacaccctgggcgtcttccagttcgacggcgggccc
atgcggtccctgctgcggctgatgaagcccgacaacttcgaggacatttccgccgtctcg
gccctgtaccggccgggcccgatgggcatgaactcgcacaccaactacgccctgcgcaag
aacggccagcaggagatcaccccgatccacccggagctggaggagcccctcaaggagatc
ctcggcctcacctacggcctcatcgtgtaccaggagcaggtgcagaaggccgcgcagatc
atcgccgggtactcgctcggcgaggccgacatcctgcgccgcgtgatgggcaagaagaag
cccgaggaactggcgaagaacttcgtcctcttccaggagggcgcgaagaagaagggcttc
tccgacgaggcgatccaggcgctctgggacgtcctggtgcccttcgccgggtacgccttc
aacaaggcgcactcctccgcgtacggcctggtcacctactggaccgcgtacctcaaggcc
aactacccggccgagtacatggcggcgctgctcacctcggtcaaggacgacaaggacaag
tcggccgtctatctgaacgagtgccggcgcatgaagatcaaggtgctgccgccggacgtc
aacgagtcggtgcacaacttcgccgcccagagcgacgacgtgatcctcttcggcctcgaa
gcggtccgtaacgtcggcaccaacgtggtcgagtcgatcatccgcgcccgcaaggcgaag
gggaagttctcctccttccccgactacctcgacaagatcgaggcgcaggcgtgcaacaag
cggaccaccgagtcgctgatcaaggccggtgccttcgacgcgctcggccacacccgcaag
gggctcaccgcgcactacgagcccatgatcgacaacgtggtggcggtcaagcgcaaggag
gccgaggggcagttcgacctcttcggcggcatgggcgacgagagcgccgacgagccgggc
ttcggactcgacatcgagttcaccgacgaggagtgggacaagacctaccttctcgcccag
gagcgcgagatgctcggcctctacgtctccgaccacccgctcttcgggctggaacacgtc
ctctccgacaaggccgacgccgggatcgggcagctcaccggcggcgacttcggggacggc
gcggtcgtcacggtcggcggcatcatctccggcctccagcgcaagatgaccaagcagggc
aacgcctgggccatcgccaccgtcgaggacctcgccggttccatcgagtgcatgttcttc
cccgccacctaccagctggtctccacgcaactcgtcgaggacgccgtcgtcttcgtcaag
gggcgcctggacaagcgggaggacatcccccggctggtcgcgatggagctccaggtcccc
gacctctccaacgcgggcaccaacgccccggtgatcatcaccatcccggccgtcaaggtg
accccgccgatggtcagccgcctcggcgaggtgctcgactcccaccgcggcaactccgag
gtgcggatcaagctccagggcccccggaagaccacggtgctccggctcgaccggcaccgg
gtccagcccgacccctcgctcttcggcgacctgaaggtgctgctcggcgcctcctgcctg
gcgggctga
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integrated database retrieval system
