Streptomyces koyangensis: D0C37_28645
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Entry
D0C37_28645 CDS
T06436
Name
(GenBank) 3'-5' exonuclease
KO
K02342
DNA polymerase III subunit epsilon [EC:
2.7.7.7
]
Organism
sky
Streptomyces koyangensis
Pathway
sky03030
DNA replication
sky03430
Mismatch repair
sky03440
Homologous recombination
Brite
KEGG Orthology (KO) [BR:
sky00001
]
09120 Genetic Information Processing
09124 Replication and repair
03030 DNA replication
D0C37_28645
03430 Mismatch repair
D0C37_28645
03440 Homologous recombination
D0C37_28645
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03032 DNA replication proteins [BR:
sky03032
]
D0C37_28645
03400 DNA repair and recombination proteins [BR:
sky03400
]
D0C37_28645
Enzymes [BR:
sky01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.7 Nucleotidyltransferases
2.7.7.7 DNA-directed DNA polymerase
D0C37_28645
DNA replication proteins [BR:
sky03032
]
Prokaryotic type
DNA Replication Elongation Factors
Elongation factors (bacterial)
DNA polymerase III holoenzyme
D0C37_28645
DNA repair and recombination proteins [BR:
sky03400
]
Prokaryotic type
SSBR (single strand breaks repair)
MMR (mismatch excision repair)
DNA polymerase III holoenzyme
D0C37_28645
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RNase_T
BCAS2
Motif
Other DBs
NCBI-ProteinID:
AXQ58174
UniProt:
A0A385DJS1
LinkDB
All DBs
Position
complement(6384588..6385301)
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AA seq
237 aa
AA seq
DB search
MTHWYEAPLAALRLRATGPDAEEDRLVTAAVVVQDLAAARPRVLRWLVSPGVAVTEEEAA
RHGLTRDQVERTGRWPAPVMEEVGRALAAHAAAGRPLVVDDAPAALTLLDRELRRHRASS
LGAYLAGVPLSVLDPRVLDTHLDRYRKGSRQLDALCVRYGVPAPPPHDAVEEARTAIEVV
RALARVFAPRLQRLTPGELHALQEDWYTAQVRGGPGRAARERATTAWPLRPRAAAAV
NT seq
714 nt
NT seq
+upstream
nt +downstream
nt
atgacccactggtacgaggccccgttggccgcgctgcgcctcagggcgaccggtcctgac
gccgaggaggaccggctggtcaccgccgccgtcgtcgtccaggacctggcggcggcgcgc
ccgagggtgctgcgctggctggtcagcccgggggtggcggtgaccgaggaggaggccgcg
cggcacggcctgacgcgggatcaggtggagcggacgggccgctggccggcgccggtgatg
gaggaggtcggccgcgcgctggccgcgcacgcggcggccggccgcccgctggtggtcgac
gacgccccggcggcgctgaccctgctcgaccgtgaactgcggcgccaccgcgcctcctcg
ctcggcgcctacctcgccggggtgccgctgagcgtgctggacccgcgggtcctcgacact
cacctggaccggtaccgcaagggctcgcgccagctggacgccctctgcgtccggtacggc
gtaccggcgccgcctccgcacgacgccgtggaggaggcgcggacggcgatcgaagtggtg
cgggcgctcgcgcgggtcttcgcgccccggctccagcggctgacgccgggcgaactccac
gcgctccaggaggactggtacaccgcgcaggtgcggggcggaccggggcgggcggcgcgg
gagcgggccaccacggcgtggccgctgcgcccgcgggcggcggcggccgtctga
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