Streptomyces koyangensis: D0C37_30275
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Entry
D0C37_30275 CDS
T06436
Name
(GenBank) Fpg/Nei family DNA glycosylase
KO
K10563
formamidopyrimidine-DNA glycosylase [EC:
3.2.2.23
4.2.99.18
]
Organism
sky
Streptomyces koyangensis
Pathway
sky03410
Base excision repair
Brite
KEGG Orthology (KO) [BR:
sky00001
]
09120 Genetic Information Processing
09124 Replication and repair
03410 Base excision repair
D0C37_30275
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
sky03400
]
D0C37_30275
Enzymes [BR:
sky01000
]
3. Hydrolases
3.2 Glycosylases
3.2.2 Hydrolysing N-glycosyl compounds
3.2.2.23 DNA-formamidopyrimidine glycosylase
D0C37_30275
4. Lyases
4.2 Carbon-oxygen lyases
4.2.99 Other carbon-oxygen lyases
4.2.99.18 DNA-(apurinic or apyrimidinic site) lyase
D0C37_30275
DNA repair and recombination proteins [BR:
sky03400
]
Prokaryotic type
SSBR (single strand breaks repair)
BER (base exicision repair)
DNA glycosylases
D0C37_30275
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
H2TH
Fapy_DNA_glyco
zf-FPG_IleRS
Zn_ribbon_TFIIB
NFACT_N
Ribosomal_S13
Zn_ribbon_RRN7
Motif
Other DBs
NCBI-ProteinID:
AXQ58471
UniProt:
A0A385DL12
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All DBs
Position
6725961..6726821
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AA seq
286 aa
AA seq
DB search
MPELPEVEALREFLVDHAVGRTVERVLPVAFHVLKTYDPPATDLTGQRITAVDRYGKFLD
LTVGPLHLVTHLARAGWLKWQDTVPATPPRPGKGPLALRVVLDDGSGFDLTEAGTQKRLA
VYVVRDPADVPGIARLGPDPLADDFDRDRLAALLAPESRLLKGALRDQSLIAGIGNAYSD
EILHAARLSPFKNAGRLTEEETTALYEALRTTLTEAVERGRGVAAGHLKKEKKTNLRVHG
REGEPCPVCGDTIRSVNYADSSLQYCPTCQTGGKVLADRRLSRLLK
NT seq
861 nt
NT seq
+upstream
nt +downstream
nt
atgccggagctgccggaggtcgaagccctgcgggaattcctcgtcgaccacgccgtgggc
cggacggtcgagcgggtcctgccggtcgccttccacgtcctgaagacctacgacccgccc
gccaccgacctcaccgggcagcggatcaccgccgtcgaccggtacggcaagttcctcgac
ctgaccgtcggccccctccacctcgtcacccacctggcccgcgccggctggctcaagtgg
caggacaccgtccccgccaccccgccccgccccggcaagggcccgctggccctgcgcgtc
gtcctcgacgacggctccggcttcgacctcaccgaggccggcacgcagaaacgcctcgcc
gtgtacgtggtccgcgaccccgccgacgtccccggcatcgcccggctcggccccgacccc
ctcgccgacgacttcgaccgcgaccggctcgccgcgctcctcgcccccgagagccgcctg
ctcaagggcgccctgcgcgaccagagcctgatcgccggcatcggcaacgcctacagcgac
gagatcctgcacgccgcccggctctccccgttcaagaacgccggacgcctcaccgaggag
gagaccaccgccctgtacgaggcgctccgcaccaccctcaccgaggccgtcgagcgcggc
cggggcgtcgccgcgggccacctcaagaaggagaagaagaccaacctgcgcgtccacggc
agggagggcgaaccctgccccgtctgcggcgacaccatccgctcggtcaactacgccgat
tcctcgctccagtactgccccacctgtcagaccggcggcaaggtcctcgccgaccgccgc
ctcagccgcctgctcaagtga
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