Serpula lacrymans: SERLADRAFT_355643
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Entry
SERLADRAFT_355643 CDS
T03135
Name
(RefSeq) hypothetical protein
KO
K12830
splicing factor 3B subunit 3
Organism
sla
Serpula lacrymans
Pathway
sla03040
Spliceosome
Brite
KEGG Orthology (KO) [BR:
sla00001
]
09120 Genetic Information Processing
09121 Transcription
03040 Spliceosome
SERLADRAFT_355643
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
sla03021
]
SERLADRAFT_355643
03041 Spliceosome [BR:
sla03041
]
SERLADRAFT_355643
03036 Chromosome and associated proteins [BR:
sla03036
]
SERLADRAFT_355643
Transcription machinery [BR:
sla03021
]
Eukaryotic type
RNA polymerase II system
Coactivators
SAGA/TFTC/STAGA complex
SERLADRAFT_355643
Spliceosome [BR:
sla03041
]
Complex A
U2 snRNP components
U2 snRNP specific factors
SERLADRAFT_355643
Complex B
SERLADRAFT_355643
Complex C
U2 SnRNP specific factors
SERLADRAFT_355643
Chromosome and associated proteins [BR:
sla03036
]
Eukaryotic type
Histone modification proteins
HAT complexes
STAGA complex
SERLADRAFT_355643
TFTC complex
SERLADRAFT_355643
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
Beta-prop_RSE1_1st
Beta-prop_RSE1_2nd
CPSF_A
Methyltransf_36
Motif
Other DBs
NCBI-GeneID:
18809485
NCBI-ProteinID:
XP_007317453
JGI:
355643
UniProt:
F8NV69
LinkDB
All DBs
Position
Unknown
AA seq
1216 aa
AA seq
DB search
MHLYNLTLQPPSAVTQAIVGNFSGVRQQEIIVSHGTRLELLRPDVQTGKLSTVIATDVFG
SIRSLAAFRLTGGTKDYAIVGSDSGRIVILDYDPRTSSFVKLHQETFGKSGSRRIVPGQY
LATDPKGRSVMISAMEKAKLVYILNRDAAANLTISSPLEAHKNAAIIHHIVGLDVGFENP
LFAALEVDYTESDQDPTGEAFNNAEKMLTYYELDLGLNHVVRKWSEPTDPRANLLVQVPG
GQLASSERFDGPSGVLVCCEDHIIYRHMGVPQHRIPIPRRRHPLEDPERGIIIVAAVMHK
MKGAFFFLLQSEDGDLYKVTIEHEDDEVKALKIKYFDTVPVASSLCILKSGFLFVASEFG
NHYLYQFQKLGDDDNEPEFSSTSYPSFGMAEPSMPLPHAHFHPRALDNLALADEMESLDP
ILDSKVMNILPNSDTPQIFAACGRGARSSLRMLRHGLDVEESVSSELPGIPNAVWTTKRK
EDDPFDSYIILSFVNGTLVLSIGETIEEVQDTGFLSSAPTLAVQQIGADALLQVHPQGIR
HVLADRRVNEWRVPQGKTIVSAATNKRQVVVALSSAELVYFELDLDGQLNEYQDRKAMGS
TVLALSVGEVPEGRQRTPYLAVGCEDQTVRIISLDPESTLETISLQALTAPPSAICIADM
LDASINKTQPTMFVNIGLQNGVLLRTVLDPINGQLTDTRTRFLGTRPIRLVRVQIHGNPA
ILALSSRSWLNYTHQNLMHFTPLIFENLDYAWSFSAELSPEGLIGIAGSVLRIFQIPKLG
TKLKQDTIPLSYTPRKFISHPTNRYFYLIEGDHRVLGEDAAAKRLDEMRQRGKMVDDNML
DLPPEVFGRPKAPAGTWASAIRIIDPVEAKTLSMITLDSNECAFSLAIVPFSARGNELHL
VVGTAADTFLAPRSCSSGFLRTYKFTEDGTGLELLHKTETDDVPLALMAFQGRLVAGVGK
ALRIYDIGKKKLLRKVENKARATFSTAIVTLNTQGSRIIVGDMQESISFVAYKAPENRLL
VFADDNQPRWITATTMVDYTTIAAGDRFGNIFVNRLDPKVSEQVDDDPTGAGILHEKGLL
MGAPHKTKMLAHFHIGDLVTSINKVSLVAGGREVLLYTGLHGTIGILVPFVSKEDVDFIS
TLEQHMRTEQGSLVGRDQLSWRGYYTPVKSVVDGDLCETYARLPGTKQSAIAGELDRTVG
EVLKKLEQLRVTASGF
NT seq
3651 nt
NT seq
+upstream
nt +downstream
nt
atgcatttgtacaatttaacactgcaacctccttctgcagtgacccaggctattgtgggc
aacttttctggggtcagacaacaagaaatcatcgtatcccatggaactcgtcttgaactt
ctacgaccagatgtgcaaaccgggaagttgtctaccgtcattgccacggacgtgtttggc
tccatccgttctctcgctgcttttcggttgacgggtggtacgaaggactacgcaatagta
gggtcagactcgggccgcattgttattctggattatgatccacgtacttcaagtttcgtt
aagcttcaccaagaaacttttggaaaatccggttcgcggcgtattgttcctggtcaatat
cttgctacggacccaaagggacgcagtgtcatgatatctgcgatggaaaaagccaagctc
gtgtacatcctcaaccgagatgctgctgcgaacttaacgatttcatcacctctcgaggcg
cacaaaaatgcagcaattattcaccatatagttggtcttgacgtcggatttgagaacccc
ttatttgctgctctggaagttgattacactgaatcagaccaggatccaactggtgaggct
tttaacaacgccgaaaaaatgttaacatattacgaacttgacctgggccttaatcatgtt
gttagaaagtggagtgaaccaaccgatccccgggctaacctgcttgtgcaagttcctggt
ggacagttggcatcttcagagcgctttgatggcccttctggcgtgttggtttgttgtgaa
gaccatattatatatagacatatgggtgttcctcagcatcgcattcctataccgcgacga
cgacatccgcttgaagatcctgaacgaggcattattatcgtagccgctgtgatgcataaa
atgaagggtgctttcttcttccttttgcaaagcgaagacggtgatctgtacaaggtgacc
atcgagcatgaagatgatgaagtgaaagcattaaaaatcaagtattttgatactgtacct
gtggcatccagtctttgtattctcaaatctggtttcctttttgttgcgtctgagttcgga
aatcattatctttaccaatttcaaaaattaggtgatgatgacaacgagccagaattcagt
tccacgtcttacccttcgttcggcatggccgaaccttcaatgcccttgcctcatgcacat
tttcatcctcgtgctttagataaccttgcactcgctgacgaaatggaatcattagatcca
atactggactcgaaggtcatgaatattctacccaactcggatactccacaaatttttgcc
gcctgtgggcgtggggcacgtagctcacttcgaatgctaaggcatggtctcgatgttgaa
gaatccgttagctctgaattgccaggtattcccaatgctgtctggactactaaacggaaa
gaggacgatcccttcgactcgtatattattctctcattcgtgaacggtactctcgtcttg
tctattggcgaaaccatcgaggaagttcaggacactggtttcctttcgtctgctccgaca
ttggccgttcaacaaattggtgccgatgccctactgcaggtacatccccagggtattcgt
cacgttttggccgaccgacgcgtcaacgaatggcgtgttccccaaggcaagactatagtc
agtgcggcaaccaataaaaggcaggtcgttgttgccctaagctccgctgagctggtttac
ttcgagcttgacttggatggacaactcaacgagtaccaagatcgcaaggcaatgggctcc
actgtgttggctttaagtgttggtgaggttcctgaaggccgccagaggactccttatctt
gctgttgggtgtgaggaccagactgtccgtatcatttctttggaccctgagagtaccctg
gaaaccattagtttacaagctttaaccgcacctccttcagccatttgtattgccgatatg
ctggacgcgagtatcaacaaaacgcagccaactatgtttgtgaatatcggcttacaaaat
ggtgtgttactgcgcacggtactcgatccaatcaatggccagttgaccgacacgaggact
cgcttcttagggacaaggcccatacgcttggttcgcgtacaaattcatgggaatcctgcc
atccttgcactttcatcaagatcctggcttaactatacacaccaaaatctgatgcacttc
acaccactaattttcgagaaccttgattatgcatggagtttttctgcagagctcagtcca
gaagggcttattggtatcgccggtagtgtattacgtatattccagattcccaagctgggt
acaaagctgaaacaagacacgatacctctttcatacactccgcgcaagttcatatcacat
ccaacaaaccgatatttttacctcattgaaggtgatcaccgtgttctgggggaagatgcg
gcagctaaaagattggatgaaatgaggcagaggggtaaaatggtagacgataatatgctt
gatttgccacctgaagtctttggtcgaccaaaagctccggctggaacatgggcatctgcc
attcggatcattgaccctgttgaggccaaaacgctcagcatgataactctagatagtaac
gagtgtgctttttctcttgctattgtgccattttccgctcgtggaaacgaattgcatctg
gtggttggtactgcagcagatacattccttgctcctcggtcatgtagtagtggatttttg
cgaacatacaagtttacagaggatggtacgggcttagagttgctacataagactgaaaca
gatgatgttcctctggcattaatggctttccaaggtcgcctggtggccggagtaggaaag
gctcttagaatttacgatatcgggaaaaagaaacttctacgaaaggttgaaaacaaggca
agagctactttttccacagctatcgtcacgttgaacactcagggctctcgaataatcgtt
ggcgatatgcaagagtcaatatcatttgtcgcttacaaagctcctgaaaatcgtctttta
gtatttgcggacgataaccagcctagatggattactgcgacgacgatggtagactacacg
acaatcgctgcgggtgaccgctttggcaatatttttgtcaataggcttgacccgaaagtg
tcggagcaagtcgacgacgatcctactggtgcaggcatcctccatgaaaagggattactt
atgggcgcacctcacaagaccaagatgcttgctcatttccacattggtgatcttgttact
tctatcaacaaggtctcgttggttgctggtggtcgcgaggtactgttgtataccggactg
cacggcacaattggtattctcgtccctttcgtgtcgaaagaagacgtggactttatttca
acactggagcaacacatgcgcactgagcagggaagtttagtcgggcgagaccagcttagt
tggcgaggctactacacgccagtcaagtcggtggtcgatggtgatctttgcgagacgtat
gcgcgattacctggcacaaagcagagcgctattgctggtgaactcgatcggacggtgggt
gaggtgctaaaaaagcttgaacaactgcgcgtaactgccagtgggttctag
DBGET
integrated database retrieval system
