Serpula lacrymans: SERLADRAFT_359856
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Entry
SERLADRAFT_359856 CDS
T03135
Name
(RefSeq) hypothetical protein
KO
K03021
DNA-directed RNA polymerase III subunit RPC2 [EC:
2.7.7.6
]
Organism
sla
Serpula lacrymans
Pathway
sla03020
RNA polymerase
Brite
KEGG Orthology (KO) [BR:
sla00001
]
09120 Genetic Information Processing
09121 Transcription
03020 RNA polymerase
SERLADRAFT_359856
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
sla03021
]
SERLADRAFT_359856
Enzymes [BR:
sla01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.7 Nucleotidyltransferases
2.7.7.6 DNA-directed RNA polymerase
SERLADRAFT_359856
Transcription machinery [BR:
sla03021
]
Eukaryotic type
RNA polymerase III system
RNA polymerase III
Core subunits
SERLADRAFT_359856
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
RNA_pol_Rpb2_6
RNA_pol_Rpb2_1
RNA_pol_Rpb2_7
RNA_pol_Rpb2_2
RNA_pol_Rpb2_4
RNA_pol_Rpb2_3
RNA_pol_Rpb2_5
Motif
Other DBs
NCBI-GeneID:
18809720
NCBI-ProteinID:
XP_007314737
JGI:
359856
UniProt:
F8NL30
LinkDB
All DBs
Position
Unknown
AA seq
1162 aa
AA seq
DB search
MANLGEEVNEWEHLNRTNWRGLGLVDPIKSVEDKWLLLPAFLKVKGLVKQHIDSFNYFVD
VDIKNIVKANNKVTSDVDPRFWLKYTDINVGYPDRTDLDAIDKSITPHECRLRDITYSAP
VVVTIQYTRGKSVVRRPNVNIGRLPIMLRSNKCILTGKNEAQLARMTECPLDPGGYFVVK
GTEKVILVQEQLSKNRIIVETDSVKGVVQASCTSSTHGGLKSKTYVATKKGKIYLRHNSI
HEDVPIVIALKALGIQADKEILLLTAGNTEAYKSAFSANLEEAAKLGVFTHHQALEWIGT
RVKVNRKVVGPRRPAWEEALEALATIVLAHVPVKGLDLRSKAIFVATMTRRVLMAMDDEK
MVDDRDYVGNKRLELAGQLLALLFEDLFKTFNSNLKSSIDKVLKKPSRTNEFDAFNTMQF
QGDHITSGFIRAISTGNWSLKRFKMERAGVTHVLSRLSFISALGMMTRISSQFEKTRKVS
GPRALQPSQWGMLCPSDTPEGEACGLVKNLALMTHITTDVEEEPIVRLAFMLGVEDISLA
TGTEIYGPHTFVVNVNGTIVGLTRYPTRFVSNFRRLRRAGRLSEFVGVYINHHHHAVHIA
SDGGRICRPMIIVESGRPRVTSDHIMLLKKGVATFDDFLRKGLVEYLDVNEENDSYIALY
ESDIVPTTTHLEIEPFTLLGAVAGLIPYPHHNQSPRNTYQCAMGKQAIGAIGYNQFNRID
TLLYLSVYPQQPMVKTKTIELIGYDRLPAGQNATVAVMSYSGYDIEDALILNKASLDRGY
GRCQVLRKNATLIRKYPNGTFDRLADAPLDENGQIQKKYDIVQLDGLAGVGERVDPGDVY
INKQTPTNANDNSFTGQAAAVPYKNSPMTYKSPVAGYIDKVLVSDTENDQTLIKVLIRQT
RRPELGDKFSSRHGQKGVCGLIVNQEDMPFNDQGINPDTIMNPHGFPSRMTVGKMIELLA
GKAGVLSGKLQYGTAFGGSKVEDMSRILIEKGFNYAGKDMLTSGITGEPMEAYVYFGPIY
YQKLSEIVVAYLSSSLNSSNLATEHMVMDKMHARARGPRATLTRQPTEGRSREGGLRLGE
MERDCLIGYGATQLLLERLMISSDKFEVNACQECGLMGYNGWCTYCKSSKRMAQLTIPYA
AKLLFQELMAMNVIPRLVLDDA
NT seq
3489 nt
NT seq
+upstream
nt +downstream
nt
atggccaatcttggggaggaggtaaacgaatgggagcatcttaatcgcaccaattggcgt
ggtttaggcttggtggacccaataaagagtgtagaggacaaatggctattgctacccgct
ttcttaaaagtcaaaggtcttgtcaagcagcacatcgactcgttcaactattttgtcgat
gtagacatcaaaaatatcgttaaagctaacaacaaagtcacatcagacgtggacccccgt
ttctggttgaagtatacagacatcaatgttggatatccagaccgaacggatctcgacgct
atagacaaaagcatcacgcctcatgaatgtcgtttgcgcgatataacttacagcgcacca
gtcgtcgtaacgattcaatacacccgtggcaagagtgtcgttaggaggcccaacgtcaac
atcggtcgtcttcccatcatgctgaggagcaacaagtgtatattgacgggaaaaaatgag
gctcagttggcccgtatgacggaatgtccactcgatccaggaggttactttgtcgtcaag
ggcactgaaaaagtcatcctggtacaagaacaactcagcaaaaatcgtattatagttgag
acggactcagtcaagggtgttgttcaagcctcttgtacatcctctactcacggcggcctc
aagtcaaaaacatatgtagctacgaagaagggcaagatatacctccggcataattccatt
cacgaagatgtgccaattgtaatagctctgaaagcccttggaattcaggcagacaaagag
atccttcttttgacagctggaaacaccgaggcgtacaagtctgcgttttcggctaatttg
gaggaagcagcaaagctcggagtgttcactcatcatcaagcgctggagtggataggaacc
cgagtcaaggtgaatcgtaaggtagttggcccccgaaggccggcttgggaggaagctctg
gaggctctagcgacaatcgttttagcgcatgtgccggtaaaaggactggacttgagatca
aaagccatctttgtggcaacgatgactcgcagagtgttgatggcaatggatgacgaaaaa
atggtggacgatagagattacgttgggaacaagcgtcttgagctggcgggtcagctactg
gcgctcctatttgaagatctattcaaaacattcaactccaacttgaagtcctcaattgat
aaagttttgaaaaagccttcacggacgaatgaattcgacgcgtttaacacgatgcaattt
cagggggaccacattacttccggcttcatacgcgcgatctcaacaggaaattggtcttta
aagagattcaaaatggagcgagccggagttacgcatgtgctgagtcgattgagctttatt
tcggcccttgggatgatgacacgtatctcgtcgcaatttgaaaaaacgaggaaagtcagt
gggcctcgagcgctacaacccagtcaatggggtatgttatgtcccagtgacactcccgaa
ggagaggcatgtgggttagtgaagaatttggcgctgatgacacatattacaacggatgta
gaagaagaaccgatcgttcgcctggccttcatgctcggcgtcgaagatatcagtttggcc
accgggacggagatatacggacctcatacctttgtggttaacgtaaatgggacgattgtg
ggcttgacgcggtaccccacgcgatttgtctcgaacttccgaaggctgcgaagagcaggg
cggctgagcgaatttgtgggcgtttacatcaatcatcaccatcacgcggtccacattgca
agcgatgggggtcgcatttgtcgtccaatgatcatcgttgaaagtgggcgcccgagagtc
acgtcggatcacatcatgttgcttaaaaagggcgtagctacgtttgatgactttttgcgt
aaaggtctcgtggaatatcttgacgtgaacgaggagaatgactcatacatcgcgctgtat
gagtccgatatagtcccgactacgacgcacctggaaatcgaaccgttcactttgcttgga
gcggttgctggccttatcccttatccacatcacaaccagtcccctcgtaatacttatcaa
tgcgctatgggtaaacaagcgataggcgcgatcggatacaatcaattcaacagaattgac
acgcttctttatctatccgtttacccacaacaacccatggtcaagacaaagactatagag
cttattgggtatgatcgtttaccagctggtcaaaacgccacagtcgctgtcatgagttac
tcaggatatgatatagaagatgctcttattctaaataaggctagccttgaccgtggctac
ggaagatgtcaagtgcttcgcaaaaatgccactcttatccgcaaatatccaaatggcact
ttcgatcgattggcagacgcgccactcgacgaaaatgggcaaattcagaaaaagtacgat
atcgttcagcttgatggtctagcaggtgtaggagaaagagttgacccaggagacgtttac
atcaacaagcaaaccccaacaaatgccaacgacaattcattcactggccaagctgcggca
gttccatacaaaaactcgccgatgacctacaaatcacctgtcgcaggttatatcgataag
gtcctggtcagtgacaccgagaacgatcagaccttgataaaagtgctgatccgacagacg
cggagaccagaactgggagataagttctcgtcacgccatggccagaagggtgtttgtggt
ctgatcgtgaatcaagaagatatgccatttaacgatcagggaataaatccagacaccatc
atgaatccgcacggtttcccctctcgtatgactgtagggaaaatgatagagctattagcg
ggaaaggctggcgttctcagcggtaaactacaatatggaacagccttcggtggttccaag
gtggaagacatgtctcgcattctgatcgagaaaggtttcaactacgcaggaaaggatatg
ctgacaagtggtataactggagaacctatggaagcttacgtgtacttcggacctatctat
taccaaaaactcagtgagatagttgttgcttacttgtctagttcactgaacagttctaat
ctcgctacagaacacatggttatggacaagatgcatgctagagctagggggccacgcgca
actttaacacgacaacctaccgaaggccggtcccgagaggggggtcttaggctcggcgaa
atggagcgtgattgtctgattggttatggtgctacacagctactcctggaacgcctcatg
atttcctccgataaatttgaggtcaacgcctgtcaagagtgcggccttatgggatacaat
ggatggtgtacctattgtaaaagctccaagagaatggcacaactaactattccttacgct
gcgaagttgttattccaggagctcatggccatgaatgtaataccacggctagtactggat
gatgcttga
DBGET
integrated database retrieval system