Serpula lacrymans: SERLADRAFT_361044
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Entry
SERLADRAFT_361044 CDS
T03135
Name
(RefSeq) DNA-directed RNA polymerase II, subunit 3
KO
K03011
DNA-directed RNA polymerase II subunit RPB3
Organism
sla
Serpula lacrymans
Pathway
sla03020
RNA polymerase
sla03420
Nucleotide excision repair
Brite
KEGG Orthology (KO) [BR:
sla00001
]
09120 Genetic Information Processing
09121 Transcription
03020 RNA polymerase
SERLADRAFT_361044
09124 Replication and repair
03420 Nucleotide excision repair
SERLADRAFT_361044
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
sla03021
]
SERLADRAFT_361044
03400 DNA repair and recombination proteins [BR:
sla03400
]
SERLADRAFT_361044
Transcription machinery [BR:
sla03021
]
Eukaryotic type
RNA polymerase II system
RNA polymerase II
Core subunits
SERLADRAFT_361044
DNA repair and recombination proteins [BR:
sla03400
]
Eukaryotic type
SSBR (single strand breaks repair)
NER (nucleotide excision repair)
TCR (transcription coupled repair) factors
DNA-directed RNA polymerase II complex
SERLADRAFT_361044
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
RNA_pol_L
RNA_pol_A_bac
Motif
Other DBs
NCBI-GeneID:
18809817
NCBI-ProteinID:
XP_007317400
JGI:
361044
UniProt:
F8NUW3
LinkDB
All DBs
Position
Unknown
AA seq
400 aa
AA seq
DB search
MQGYEEAEPTVRIREVKKDRVNFVLENVDLAFANSVRRAVMADIPTIAIDIVEIEANTTV
LPDEFIAHRLGMVPLVSANCEEGIRYTRDCTCLSGCQYCSIELRLDVACHENRTMEVTSN
HLDVVDSHTYADEGEAGEELTKRGENFGHPVGKDDVSLPPVLICKMRKGQELKLRCIAKK
GIAKEHAKWSPCSAVSFEYDPYNKLRHTTHWFETDERAEWPLSENAKEEEPPRDDEVFDF
NAKPGKFYFEVETDGSLGPQEAVMRGLAELQTKLANLILGLKSPPELDMLPGGDQGMAPP
NGHVAPSGGGWGQPATGGGWASPTAGGWGDAAAPTSNAWGTSPASGNAWGGGTSPNSNNA
WGGASAGGGGASPNANNAWGTSSTQQGWASPTQQTNSWIH
NT seq
1203 nt
NT seq
+upstream
nt +downstream
nt
atgcaaggatacgaagaagcagaacctaccgttcgtataagggaggtgaagaaagataga
gtcaactttgtattagagaatgtggatcttgcgtttgccaattctgtacggagagcagta
atggcggatattccaacaattgcaatcgatattgttgaaatagaggcgaatacaactgtt
cttcccgacgaattcattgcacatcgactcgggatggtacctctcgttagtgctaattgt
gaggaaggcatacggtatacacgggattgcacctgtctatccggttgtcaatattgctca
atagaactcaggctggatgtcgcctgtcatgagaacagaacaatggaagttaccagcaat
catttggatgttgtggatagccacacgtacgcagacgaaggtgaagcaggagaagagctc
acgaaaagaggagaaaattttggacatccggtggggaaagacgatgtatctcttccacct
gtcctgatctgtaaaatgcggaaaggacaagagttaaaactccgttgtattgctaagaag
ggaatcgcgaaggagcatgctaagtggtcaccctgttccgctgtatcttttgaatacgac
ccgtacaacaaactccggcacacgacgcattggttcgaaacggatgaacgtgcagaatgg
ccacttagcgaaaatgcaaaagaggaagagcctccgagagacgatgaagtctttgatttc
aatgcaaaacctggcaaattctattttgaagtggaaaccgatgggagtttgggaccacag
gaggcagttatgaggggtctagctgagttacaaactaagcttgctaacctgatcttgggc
ttgaaaagcccaccagagctggacatgcttccaggaggtgatcagggcatggcaccccct
aatgggcatgttgcaccaagcggtggagggtggggccaacctgcaaccggaggtggttgg
gcaagtccaactgcaggaggatggggtgatgccgctgctcctactagtaatgcctgggga
actagtcccgcgagtggaaatgcatggggaggtggcacgagccccaactcaaataatgca
tggggaggggcaagcgcaggaggaggcggagcaagccctaatgcaaacaacgcttgggga
acatcatccacccaacagggttgggcgagtcccactcagcaaaccaatagctggatccat
tga
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