KEGG   Serpula lacrymans: SERLADRAFT_361263
Entry
SERLADRAFT_361263 CDS       T03135                                 
Name
(RefSeq) hypothetical protein
  KO
K12603  CCR4-NOT transcription complex subunit 6 [EC:3.1.13.4]
Organism
sla  Serpula lacrymans
Pathway
sla03018  RNA degradation
Brite
KEGG Orthology (KO) [BR:sla00001]
 09120 Genetic Information Processing
  09123 Folding, sorting and degradation
   03018 RNA degradation
    SERLADRAFT_361263
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03019 Messenger RNA biogenesis [BR:sla03019]
    SERLADRAFT_361263
Enzymes [BR:sla01000]
 3. Hydrolases
  3.1  Acting on ester bonds
   3.1.13  Exoribonucleases producing 5'-phosphomonoesters
    3.1.13.4  poly(A)-specific ribonuclease
     SERLADRAFT_361263
Messenger RNA biogenesis [BR:sla03019]
 Eukaryotic type
  mRNA surveillance and transport factors
   mRNA cycle factors
    P-body specific factors
     SERLADRAFT_361263
  mRNA degradation factors
   3'-5' decay
    Ccr4-NOT complex
     SERLADRAFT_361263
SSDB
Motif
Pfam: Exo_endo_phos LRR_8 LRR_4 LRR_14 LRR_1 LRR_LRWD1 LRR_R13L1-DRL21
Other DBs
NCBI-GeneID: 18809834
NCBI-ProteinID: XP_007317910
JGI: 361263
UniProt: F8NU22
LinkDB
Position
Unknown
AA seq 660 aa
MVQGSPGSAPSQIINPQWQQQLLKCEMVRSSRSPHHRARASAMASRTVTKSAITITNPNL
IKPSPSASTDVNDAASKSSDGASPVPAAATSTSEVSPSAGSAYVANHPSSTVAPIAEISR
ITASKPPQNSWNSLDMGGVNLKNIPSHSGLFSFTFLINLYLNHNALSSVPPEIAKLRHLE
LLDLSGNNLTVIPSEVGMLTHLKELYVFDNHISTLPSELGTLHQLQTLGVEGNPLDTSLK
AIIQKDGTPALISFLRDSCPVPVPPPERQWKNLISQAERDTLASDPNTETFSVLCYNILC
ERFATERLYGYTPSWALSWAYRKELILTEIVNYDSDFLCLQEVDIAQYEDYFIKNLKAHD
YEGVYWPKSRYKTMSDADRRQVDGCAIFYKADKYQLVEKHLIEFSTVAMQRPDFKKTDDM
FNRVLGKDHIAVIGLFENKESGTRIIVANAHLHWDPAYRDVKLVQAALLIEEIEKIANDF
SKYPPRLPPTSSSSSDFDSASSKPSRVPPTYSDGTKIPVIISGDYNSIPESGVYEFLANG
SVPHDHPDFMSHMYGRYTSEGLRHRLGLKSAYAGTDELTLTNYTPSFQGVIDYIWYSTGN
LGVNAVLGEVDRGYLEKVVGFPNAHFPSDHVCIVSEFRVKPPRDNPPRPPPVFSTMNGTH
NT seq 1983 nt   +upstreamnt  +downstreamnt
atggtccaaggctcccccggaagtgcaccaagccaaatcatcaatcctcaatggcagcag
cagttgctaaagtgtgagatggttcgttcttctcgttctccccatcaccgtgcccgtgcc
agtgccatggcttctcgcaccgtcactaaatcagcaatcacaatcacaaaccccaatttg
atcaagcctagccctagtgcaagtactgacgtcaatgatgcggcttcaaagagcagtgac
ggagcatccccagttccggcagctgcaacaagtacatctgaagtttccccaagtgcaggt
agtgcttacgtcgcaaatcacccatcctcaactgtcgccccgatagcagaaatttcaagg
attactgcgagtaaaccaccgcagaatagctggaattccttggatatgggcggggttaac
ctcaagaacattccttcacattctggtcttttctcattcaccttccttatcaacctatat
ctcaatcacaacgccttgtcatctgtacctcccgagattgcgaagttgcggcacctcgag
cttctagacctctcgggaaacaacctcaccgttatcccgtcagaggttggtatgctcaca
cacctcaaagaactctatgtattcgacaaccacatcagcacgttaccatctgagcttggt
accttgcaccaactacagactcttggagtggaagggaatcctctagatacatcgctcaaa
gccatcatacaaaaagacggtactccggctttgatatccttcctccgtgattcatgtccc
gtgcccgttcctccaccagagcggcagtggaaaaacctcattagtcaagcagaaagagac
acgctagcatcagatccaaacacagaaaccttcagcgttctctgctataacattctttgc
gagaggttcgccacggagcgattgtatggatacacgccttcttgggcattatcttgggct
taccgcaaggaactcattttaaccgagatcgtgaattacgattcggacttcttgtgcttg
caggaggtggacatcgcacaatacgaagattactttatcaagaacttgaaggcacatgac
tacgaaggggtgtactggccaaagtcacggtacaagaccatgagtgatgctgaccgacgg
caggtagatggctgtgccatcttttacaaggcggataagtatcaattagtagagaagcat
ctcatcgagttcagtaccgtagcgatgcagcgtccggacttcaagaaaacggatgatatg
ttcaaccgcgttcttgggaaagaccacatcgccgtcataggtctctttgagaataaggag
agcggaacgcgcatcatcgtcgcaaatgcacatcttcattgggaccctgcatatcgggat
gtcaaactcgtacaagctgcgctactgatcgaagagatcgagaaaattgccaatgatttt
tccaaatatccgccacgcctacctcctacatcatcatcgtcctcggactttgacagtgct
tcatccaagccttcgcgggtgcctccaacgtattctgacggaacgaagattccagtgatt
ataagtggagactacaactcgattcccgaaagcggggtatacgagttcttggcgaacgga
agcgtgccgcacgatcaccccgatttcatgtcgcacatgtatgggagatatacatctgaa
ggactgagacatcgactcgggctgaagagtgcatacgctggcacagatgagcttaccttg
acgaactacacacccagcttccaaggtgttatcgattacatctggtactcaactggaaat
ttgggtgttaacgccgtcttgggagaagtcgacagaggttatcttgagaaagtcgtcggg
ttcccgaacgctcatttcccttctgaccacgtttgcatcgttagcgagttccgggttaaa
cctccgagggataaccctccacgaccgccacccgtcttctcgacgatgaatggtacacat
tag

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