Serpula lacrymans: SERLADRAFT_362944
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Entry
SERLADRAFT_362944 CDS
T03135
Name
(RefSeq) hypothetical protein
KO
K12604
CCR4-NOT transcription complex subunit 1
Organism
sla
Serpula lacrymans
Pathway
sla03018
RNA degradation
Brite
KEGG Orthology (KO) [BR:
sla00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
03018 RNA degradation
SERLADRAFT_362944
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
sla03019
]
SERLADRAFT_362944
Messenger RNA biogenesis [BR:
sla03019
]
Eukaryotic type
mRNA surveillance and transport factors
mRNA cycle factors
P-body specific factors
SERLADRAFT_362944
mRNA degradation factors
3'-5' decay
Ccr4-NOT complex
SERLADRAFT_362944
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
Not1
CNOT1_CAF1_bind
DUF3819
CNOT1_TTP_bind
CNOT1_HEAT
ARM_Cnot1
NOT1_connector
Motif
Other DBs
NCBI-GeneID:
18809955
NCBI-ProteinID:
XP_007321468
JGI:
362944
UniProt:
F8P4Z5
LinkDB
All DBs
Position
Unknown
AA seq
1921 aa
AA seq
DB search
MLNLLSDSPSDSPTLDANQRQALIAAAQAKYGPEIVAPILQRIFPTLSLPPGASLVQTLI
QLGPDITSDADTIRALLLRFGISDATPPRDSQVIELITSLARLAAEGTTLCDVGALVRAL
SSFPVNLNWANVIKAFDWPDRHGVDTATLKLLIAILVNCPREADPHAVTGFWGTWSNSLY
QLKLLDALLSLPADTFSFVSLPGRRIVTVDDMANASPTIKSLAANVQGHTWNSVELFEVL
VRQSCSESIDIKNCVQEMLDKALKISAELVHMGLLEVKDPRWSEIRIECSQKLLNMFLAG
HPNHQLVFMRLWQIEPSYLTDAFRDFYEESPLNITRILDVAQDLKILENLLEVRPFTFSL
DVAALASRREYLNLDKWLLDNVNNHGAEFLHAAILFLEIKMDAEKAARVSDPATESRTMS
LNPQIIAVFLRLLRHNSAKMSREDIDYCLDVRNTCLQVYPRLMSLTPGSDAEPGLTVVNY
SPEIEAEVDAIYKQMYDEQTTIDEVVSLLQRSKASTDSRDHEIFSCMLHFLFDEYKFFQS
YYPPRELAMTGYLFGSLIQHQLVDYLPLGIAIRYVVDALNCPPETNLFKFGLQALSRFES
RLSEWQPLCQALLRIPHLMEARPDLTAVIHRAIVAGGDESLSSADMRGITAGLTADPAPV
FTAIQPDTLEGEIIAPPEELSDKILFIVNNLAPSNFDSKLAEMQEHFDDAFSRWFANYLV
DQRVSTEPNNHQLYLRFLDALDKQPLAKLILQETFIKSAALLNSEKTAQNSSERATLKNV
GAWLGSITLARDKPIMHKNLSFKDLLVEGYDNGRLIVSIPFVCKTLEPCARSKVFKPPNP
WLMAVISLLAELYHYADLKLNLKFEIEVLCKGLDIDLDAVEATTVLRNRPSADSLAGPPL
PEYVADIDSIPMGGYDPAQVHGDPQVLGLGPTSPAESQRAISAHIEAILATLVHHVVINP
QFPSLQSNHSFKRAIQLAVHHAVREIIMPVVERSVTIAGISTRELVAKDFATEASEEKLR
KAAHLMAQKLAGSLALVTCKEPLKSNLGTHIRSFLAEHGFNEVGLQALKHVIVILVQDNL
DIACSAIEKAAMERAISDVDEGFAASYDVRRRHHETRNPSVFWDPAAPPSSFSGNLPEPL
RIKSTGLQPHQAAVYEDFALDSKRRVVTSRPSSTVSYRNEQMGALYSASPAPDHTLHNPP
AMNHQDAMERFSVLLRDMEAVVMQVPVQSLASLPPNHDIRHMVRQILYLASESLDRQRTP
LLMSQKIVQLLYKSSSQLGREIYVTLLDQLCHSFEDVAKEAITWLLYAEDDRKLNVPVTV
ALLRSGLVNMSLQDQQLATNMFKEPRPTLLTFAANLIRECLSSEPPVASQSQFAYSLEIL
NQLSQAGKVNEEFVFFNFCALPIRQSSVKPETEQLREKLFIWFQQWVAIFQRSHSPEKAF
VPFITQLTKQGILKVEDVSSFFFRVCAESSVNSYIKCASTGEYEYAFQALDAMSRLIVYI
IKYHGDASGINNDQAKVHYLTKILSIFVLVLANMHEEQGAVFQQKPFFRFFSSLINDLHS
IEAHLGTAYFQLLIAISDTFSSLQPTYFPGFSFSWMCLISHRLFMPKLLLSENREGWSAF
HKLLLSLFKFLSPFLKEADLQVPSRDLYRGSLRLLLVLLHDFPEFLSEYYFTLCDVIPPR
CIQLRNIILSAFPPAIILPDPHLRNIKFDSIPEMGPIPPILSDFASGLKNGDLRNYLDQY
LLNRGTPSFLPSLKERLRLPGGVEGSSESYNLSLINSLVMYIGVSSVAQAKARSGSSLFV
ASDPGVIALQYLVTNLDVEGQHHILSSMVLHLRYPNAHTHWFSSLLLHLFVEVKDERFKE
VMTRVLLERFIVHRPHPWGALVTFIELLRNPKYEFWHKEFIRVAPEVTLLLESVARSIYQ
P
NT seq
5766 nt
NT seq
+upstream
nt +downstream
nt
atgttaaatttattatccgactcccctagtgattctcctacccttgacgcaaatcaacgt
caggccttgattgctgctgcacaagcgaaatatggcccagaaatcgttgctccaatttta
caaagaattttcccgactctcagtttaccacctggcgcctctcttgtgcagactttaatc
cagcttggcccggacattacaagtgatgcagacactattcgtgcattgctcttgcggttt
gggatatcagatgctacgcctcctcgtgattcccaagttatagagttgatcacaagttta
gctcgtctggctgccgaaggaaccaccctatgtgatgttggtgccttagtgcgtgctctg
agcagttttcctgtgaatctcaattgggcaaacgtcatcaaggcattcgattggccagat
cgtcatggcgttgatacggcgactctcaaattattaatcgctattctcgtcaattgccct
cgcgaggctgacccccacgctgttaccgggttctggggaacgtggtcaaattctttgtac
cagttaaaattactcgacgcgctactctccttacctgcggataccttcagtttcgtctct
ttgcccgggcgccgcatcgttaccgttgatgatatggccaatgctagccccacaataaaa
tccttggctgcgaatgttcagggacatacctggaattccgtggaactttttgaggtttta
gttcggcagtcgtgctcagaaagcattgacataaagaattgcgtgcaagaaatgttggat
aaggcgctgaagattagtgctgaactggtgcatatgggactattggaggtcaaagacccg
agatggagcgagatacgcatagagtgttcccagaagctgttgaatatgttccttgctggc
caccctaatcatcaactggttttcatgcgtttgtggcaaattgagccatcatatcttacc
gatgcattccgcgacttctacgaggaaagcccgcttaatattaccagaattttggacgtg
gcgcaagatttaaagattctcgaaaatctactggaagttcgcccattcacgttctcgttg
gatgtggctgcgttggcatctcgtagggaatatttgaatctggataaatggttgctggat
aatgtaaacaaccacggggcagaattccttcacgcagctatcctcttcctagagattaag
atggacgcagagaaagcagcccgagtttctgaccctgccacagaaagccgcaccatgtcc
cttaaccctcaaattatcgctgtcttcctccgcttgcttagacataattcggccaagatg
tctcgagaagatattgactattgtcttgatgtccgcaacacatgcctgcaggtgtaccct
cgattaatgagcctgaccccaggctctgatgcagaaccagggctcactgtggtcaactac
tctcctgaaatcgaggccgaggtggatgcaatctacaagcagatgtatgacgaacagacc
accatcgatgaggttgtatccttgctgcagcgcagcaaagcatcgaccgattctagagac
cacgaaatattttcatgcatgcttcactttcttttcgacgaatacaaattttttcaatcg
tactacccgccacgcgagcttgctatgaccggttacttattcgggtctttaattcaacac
cagctcgtggattaccttccccttggtatcgctatccgctacgtggtggatgcattgaat
tgccccccggaaaccaatctgtttaaatttggtcttcaagcgctatcacggtttgaatca
cgtttgtctgaatggcagcccctgtgccaggcgctccttaggatcccccaccttatggag
gctcgtcctgatctcacggccgtcatacaccgtgctatcgttgctggtggtgacgagtcc
cttagcagtgctgacatgcgcggaatcactgcaggtttaactgcggatcccgcgcctgtc
ttcacagccattcaaccagacacactcgaaggtgaaattatcgcccctccggaagagctt
tccgataaaatattattcatcgtaaacaatctggcgccgagcaactttgattccaagctt
gctgaaatgcaagagcattttgatgatgcattttctcggtggtttgcgaactatctcgtc
gatcagcgggtcagcacggagccgaacaatcatcagctatacctgcgattcttggatgca
ctggataagcagccattggccaagctaatcctccaggaaacctttattaaatcggctgct
ctgctgaatagtgaaaagacagcccaaaacagctcggagcgtgccactctgaagaacgtt
ggcgcatggcttggcagcatcactctcgctcgcgacaaaccaattatgcacaaaaatctg
tctttcaaagacctcctcgtagaaggctatgacaacggtcggctcatcgtctccatcccc
ttcgtctgcaaaactctcgagccatgtgccaggtcgaaagtcttcaaacctcccaaccct
tggttgatggctgtgatcagtttattagcggaactttaccattacgccgacctgaagctc
aacctgaaattcgagatcgaagtactttgcaaaggccttgacatcgatctcgatgccgta
gaagccacaactgtgttgcgaaacaggccttcagcagattctctggctggtccgccgttg
ccagaatatgtggctgacatcgattccattcctatgggtggttacgatccagctcaggtg
cacggtgatccccaggttcttggtcttggaccaactagcccggcagaatcacagcgagcg
ataagcgctcatatagaggccatcctagcaacccttgtgcaccatgttgttatcaatcct
cagtttccatccttgcagtccaaccatagtttcaagcgggcaatacaacttgctgtccac
catgctgtccgagagattattatgcctgtggtggagcgatcagtgacgattgcaggaatc
tcaactcgtgagcttgttgctaaggactttgctacagaagcaagcgaggagaagttgcgc
aaagctgctcatttgatggctcaaaagctggctggtagtcttgcgttggtcacgtgcaaa
gagcctctcaaaagcaacctcgggactcatatacgttcattcctggctgagcatggcttc
aatgaggttggtctccaagctctcaaacacgtgatagttattttggtgcaggataatcta
gatattgcctgctctgcgatagaaaaggcagcgatggagcgcgctatctctgatgtggat
gagggattcgcggcgtcgtacgatgttcgtcggcgtcatcacgagactcgaaatccgtca
gtgttttgggatcctgcagctcctccatctagcttctcgggaaatcttccagaaccgttg
cgcatcaagtctactggtctgcaacctcatcaagcagcagtgtatgaggactttgctctc
gactcaaaacgccgcgttgtaaccagtcgacctagttctacggtctcttatcgcaacgaa
caaatgggcgcgctttactcagcatctccggccccggatcacactttacacaatccacca
gctatgaaccatcaggacgccatggaacgcttcagcgtgttgttgagagatatggaggcc
gttgttatgcaagtaccagtacaatcattggcctcattgccgccaaaccatgatattcgc
catatggtgcggcaaatattgtatctcgcctcggaatccctcgacaggcagcgcacacct
ctcctcatgtcccagaagattgtgcagttactgtacaagagttcatctcagcttggcaga
gagatctatgtcaccttacttgaccagctttgccattcgtttgaagatgttgctaaagaa
gccatcacgtggttgttgtatgctgaggatgatcgcaaacttaatgttcccgtcacagtg
gctctacttcgcagcggtcttgtcaatatgtccttgcaagatcagcaactggccacgaat
atgttcaaagagcctcgcccgactttactcacttttgcagcaaatcttattcgggaatgt
ctatccagtgaaccgcctgtcgcttcacagagccagtttgcgtactctctagaaatactc
aatcagctttcacaggccggcaaagttaacgaagagtttgttttctttaacttctgtgcc
cttccgatccgtcaatcttcagtaaaaccggaaacggagcaactccgagaaaagctgttc
atatggttccagcaatgggtcgccatcttccagaggtctcattccccggagaaggctttc
gttcctttcattacccaacttacaaagcagggcatcctcaaagtcgaagatgtctcctct
ttcttcttccgcgtctgcgcagagtctagcgtcaacagctatattaaatgtgcatcaacg
ggagagtacgaatatgcgttccaagccctggatgcgatgtcgaggctgatcgtctacatc
atcaaataccacggagatgcctcgggcataaacaacgatcaagccaaggttcactactta
acgaaaatactttcaatttttgtgcttgttcttgccaatatgcacgaggagcaaggagcg
gtcttccaacagaaaccattcttcaggttcttttccagccttatcaatgacttgcattca
atcgaagcgcatctgggaacagcttacttccagttgttgattgcaatcagcgacactttt
agctcactgcaaccgacgtatttccctgggttctccttttcttggatgtgcttgatttct
caccgattattcatgcctaagttacttctatcagagaaccgcgagggatggtcggcattc
cataagcttttattgtcgctgttcaagttcctatcgcctttccttaaggaggcagacctt
caggtgccttcccgggacttgtaccgtggttctttacgcctccttctcgtgcttcttcac
gacttccccgagttccttagtgaatactacttcactctttgcgatgttattccgccccgc
tgcattcagctccggaatatcatacttagtgcattccctcctgccatcattcttcccgac
ccccacttgcgaaacatcaaattcgactccattcctgagatgggacccataccacccatt
ctgtccgattttgcttcgggtttgaaaaatggcgatttgcgcaactacctcgatcagtat
ctcctgaaccgtggaacaccttcattcctaccttcgctgaaagagcgtctgcggttacct
ggtggagtggaaggttcttccgagtcctacaacttgtcgttgatcaattcgcttgtgatg
tacatcggtgtatcttcagttgcgcaagctaaagcgaggagtggctcttccctcttcgtc
gcgagtgaccccggtgttatcgctttacagtatcttgttactaatctagacgttgaaggg
caacatcatatcctcagttccatggttctgcatcttcgttaccccaatgcgcacacccac
tggttcagctctttgcttctccatcttttcgtggaagttaaggatgagcgcttcaaagaa
gtcatgactagagttcttttggagcgtttcattgttcatcgccctcacccttggggtgca
ttagtcactttcatcgagctgcttcgtaacccgaagtacgagttctggcacaaagaattc
attcgcgttgcgcccgaggtcacgttgctgctagaaagcgttgcgagatccatttaccaa
ccgtag
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