Serpula lacrymans: SERLADRAFT_364022
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Entry
SERLADRAFT_364022 CDS
T03135
Name
(RefSeq) hypothetical protein
KO
K13179
ATP-dependent RNA helicase DDX18/HAS1 [EC:
5.6.2.7
]
Organism
sla
Serpula lacrymans
Brite
KEGG Orthology (KO) [BR:
sla00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03041 Spliceosome [BR:
sla03041
]
SERLADRAFT_364022
03009 Ribosome biogenesis [BR:
sla03009
]
SERLADRAFT_364022
Enzymes [BR:
sla01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.7 DEAD-box RNA helicase
SERLADRAFT_364022
Spliceosome [BR:
sla03041
]
Other splicing related proteins
Spliceosome associated proteins (SAPs)
RNA helicase-like proteins
SERLADRAFT_364022
Ribosome biogenesis [BR:
sla03009
]
Eukaryotic type
90S particles
Helicases
SERLADRAFT_364022
Pre-60S particles
SERLADRAFT_364022
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
DEAD
Helicase_C
CTE_SPB4
ResIII
Motif
Other DBs
NCBI-GeneID:
18810024
NCBI-ProteinID:
XP_007323863
JGI:
364022
UniProt:
F8PBU3
LinkDB
All DBs
Position
Unknown
AA seq
561 aa
AA seq
DB search
MADAMEDTAPSAIPGPSVKGREPFSNLDLSEPTNKALEDMGFSTMTPVQAKSIPPLLAGK
DVLGAARTGSGKTLAFLLPAVELLHRLKFKPRNGTGIIIVSPTRELALQIFGVAKDLMAH
HSQTFGIVIGGANIRAEREKLVKGVNLLVATPGRLLDHLQNTPGFVFRNLKALVIDEADR
ILEIGFEEEMKKIMTILPNDNRQSMLFSATQTTKVQDLARISLRPGPLHIDVDKEEETST
VSTLSQGYVVCPSDRRFLLLFTFLRKNLSKKVIVFFSSCNSVKYHAELLNYIDVPVLDLH
GKQKQQKRTNTFFEFINAKSGILLCTDVAARGLDIPRVDWIIQFDPPDDPRDYIHRVGRT
ARAGKVGKSLLFLLESELGFLRYLKEAKVPLNEFTFPSDRIANVQSQLEKLLQKNYFLHQ
SARDAFRSYLQSYASYSLKNIYDINALDLAKVSKAFGLSVPPRVNVNIGGGKGESGKKRR
REQSEKGEEEWEDMPLGEDAESDDDGESGHDRSGSQKRLRDRSQWKKKRVETLGQKAVDK
EMYRKGKERKTMKASGQQWSG
NT seq
1686 nt
NT seq
+upstream
nt +downstream
nt
atggccgacgcaatggaagatacggcaccgtctgcgataccaggaccaagcgttaaaggc
agagagccattttctaaccttgatctgtcggaaccaacaaataaagcactcgaagacatg
ggtttcagcaccatgacaccagtacaagcaaaatctattccacctcttctggcaggaaag
gatgtattgggtgctgcacgaacgggatcaggaaagacccttgcctttcttttacccgct
gtagagctgttgcatcggctgaaattcaagccaagaaatggaaccggtatcattatcgtc
tcgcctacgagagaacttgcgcttcagatattcggcgttgcaaaagacttgatggctcat
cactcgcaaacctttgggatcgtcattggtggtgcaaacattagggcagaacgtgaaaaa
ctggtgaaaggcgtcaacttgcttgtggctacccccggaagattactggaccatcttcag
aataccccgggttttgttttccggaatctaaaagcgctcgtgatcgacgaggccgaccga
atactggagattggtttcgaggaagagatgaaaaagataatgacaatattaccaaacgac
aatcgacaatccatgctcttttcagcaacacaaactacaaaagtacaggatctcgctcga
atatcattacggcctgggcccctgcacatcgatgtcgacaaggaagaagaaacaagcaca
gtatcgactctttcccaaggctatgttgtctgcccctcagatcgccggttccttctcctg
ttcactttccttagaaaaaatctaagcaaaaaggtcatcgtattcttctcgagctgtaat
tcggtgaaataccatgcagagctactcaattacatcgatgtccccgttctcgatctacat
ggtaaacaaaaacaacaaaagcgtacaaataccttcttcgagttcatcaacgcaaaatcc
ggtatcctcctttgtacagacgttgccgcgcgaggcctcgacattccccgcgttgactgg
ataatacagtttgacccaccagatgatcctcgtgattatatacatcgtgtaggtcgcacg
gcgcgtgcagggaaggttggcaagagtcttctcttcttgctcgagagtgaacttgggttt
ttaagatacctgaaagaagccaaggtcccgcttaatgagttcactttcccatctgaccga
atcgccaacgtgcagagtcagctcgaaaagctacttcaaaagaactatttcttgcaccag
tcagcgcgagatgctttccgctcgtatcttcaatcatatgcgtcttattctttgaaaaac
atctatgacatcaatgcgcttgatttggcgaaggtttcaaaggcatttggattgtctgtg
ccacccagagtgaacgtcaatattggtggtggaaagggggagtctggaaagaagagaaga
agggagcaatcagaaaaaggtgaggaggaatgggaagacatgcctctcggcgaagacgcg
gaaagtgacgacgacggcgagagtggccacgatcgctcgggatcgcagaagcgcctacgg
gatcgaagccagtggaagaaaaaaagagttgagacactcggacaaaaagcagtggataaa
gagatgtacaggaaggggaaagagaggaaaactatgaaagcgtctgggcaacagtggagc
gggtaa
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