Serpula lacrymans: SERLADRAFT_375040
Help
Entry
SERLADRAFT_375040 CDS
T03135
Name
(RefSeq) hypothetical protein
KO
K11292
transcription elongation factor SPT6
Organism
sla
Serpula lacrymans
Brite
KEGG Orthology (KO) [BR:
sla00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
sla03021
]
SERLADRAFT_375040
03036 Chromosome and associated proteins [BR:
sla03036
]
SERLADRAFT_375040
Transcription machinery [BR:
sla03021
]
Eukaryotic type
RNA polymerase II system
Other transcription-related factors
Transcription elongation factors
SERLADRAFT_375040
Chromosome and associated proteins [BR:
sla03036
]
Eukaryotic type
Nucleosome assembly factors
Histone chaperones
Other Histone chaperones and regulators
SERLADRAFT_375040
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
SH2_2
YqgF
HHH_7
HTH_44
SPT6_acidic
Spt6_S1
Tex_central_region
SH2
HHH_9
Spt5_N
S1
B12-binding
Motif
Other DBs
NCBI-GeneID:
18810561
NCBI-ProteinID:
XP_007324655
JGI:
375040
UniProt:
F8PE31
LinkDB
All DBs
Position
Unknown
AA seq
1414 aa
AA seq
DB search
MADGNGVSDDSSEEAEDDEEEAKRIREGFIVDEDEDEDDEDDERRRRRKRRKRKHRRRAE
EEDEVLEEDDLELLEENTGTSFKNRLTRLRRGRESGSPPAASSSRRKAVLESSDDDLDND
DLDLPQVHDIQRIWDDERAGGREDEEDLDDMDNFIEYEDDEEGAGAMDEVEREERRRERR
RLEKERRRALGSRPELDGIDANAWSEIHEIFGDGHEYDWALVDEEAEHEEEHLKHEMKYQ
DVFEPSEIRARMLTEDDDLIRAQDIPERMQLATSSLSQSSTLSLHTTITETDLDDAAMWV
TVRLSSRKTRDFFSPDGPYNKYREPLVMAVSYALRYLLIQEFEVPYIWTHKRDYITYFNP
QEMRTQVELISLSELWRIYTLGQKYRSLVERRNALASLYARLGVEDQYFTEHIRAKIDSV
EVVADATEWLAMKYKAKKQDTYDFHFHDDDEHHETKKRKIPSRTSAYEVAKKSVVSKLAD
GFGIRPHEIAQNFMNGDHAHFVDDQELNPVAYAEQFMDPEVTNDQPPEELLRRARMILAT
EVGKDPLLRQEMRMMFKNDAQISVLPTERGVNKIDEHHPYFNFKYLYHKNINQMLDTSQF
LHIIAAEADHLVTVSIFLPSEAKAQFERRLNDAFASDSYSDTAKSWNEERARVVQETMEN
HLIPVGVKWAREWVREEVEDALANRCGGILKDRIDVAPFITADMRPGDTASVLAMSWGKG
DPQKDAITVVFLDEAGRLREHTKIDNLVDTETRDEFVDLLRRRRPDVIAISGFSMATTKL
AQRVKDIVRGKPQDETAAPDGWGADPKDSNEQAFNIPVIYVSDEVARIYQHSKRAGEEYS
ALSPIAKYCVGLARYTQSPMNEYAALGADISAIMFEDEDQHLIPKEKLLFALERALVDVT
NKVGVDINRAVNDSYYQSLLPFVCGLGPRKSQSLVQKIAGIGGHLVNRDQFIKAGLLTTN
IFLNASGFLHISHDAELKPTKNRHIDDDVQDPLDSTRIHPEDYELARKMATDALELDEED
IHDEHPSHVVSLIMQDDDNEKKLNELNLVEFAVNMFEANEDRKRHTLNDIREELLKPLSE
QRKPFPTLQPWDILTMLSGETRRTLRMGLIVSVLVLRVVKQDFVVVRLDSGVEGVINVGY
MSDEGNIAPASIVNKGQTIQGVVVEVKLDLTQDQFLVELSARPNDLAAGDGLFRKVKHDE
MWNVQQHERDSEMQARKKRAKVDQTRRVIKHPNFHNFNANQAENYLDKQQRGDVVIRPSS
KGADHLAVTWKVDEKLYQHIDVTEINIDPTGQGVGGLLVVDEKHQYADLDELIVNHVQAT
ARRVEELMAHEKFKHGSEDELHSFLKNFVMANPAKSIYGFTLNRRKPGHFSLCFLANKGS
TVQTWPVRVAPEAYYLFEATAAGVPELCDAFKVR
NT seq
4245 nt
NT seq
+upstream
nt +downstream
nt
atggcagacggtaacggggtttccgacgacagttctgaagaggcggaggacgacgaggaa
gaggcaaaaaggataagagaaggtttcattgtagatgaggacgaggacgaagatgatgaa
gatgatgaacgtcgcaggcgaagaaagcgccgtaagagaaaacatcgacgacgagcagaa
gaggaagatgaagttttagaggaagacgatctcgaacttctggaagaaaacactgggact
tctttcaaaaaccgtctgacgcgtctccgccgtggtcgtgaatcaggttctcccccagct
gcatcttcgtcaaggcgaaaagctgtgttggaatcctcggacgatgatttggataatgat
gaccttgatttaccacaggtacatgatatccagcgtatatgggatgacgagagggcaggt
ggtcgtgaggatgaagaagacttggacgatatggacaactttattgaatacgaggacgat
gaggagggcgcaggagcaatggacgaagttgagcgagaagagaggaggagggaaaggcgg
aggcttgaaaaggaaagacgtagggctttgggctctcgaccggagttagatgggatcgat
gccaatgcttggagcgaaatccacgaaattttcggtgatggtcatgagtatgattgggcg
ttggttgatgaagaggcggagcatgaggaggaacacttgaagcatgagatgaaataccag
gatgtttttgaaccgtctgagatccgtgcgcgtatgttgacagaagacgatgatctgata
cgagcccaggatatccctgaacgaatgcaactggcaacatcatctctatcccaatcctcc
actttgtctctccatacaaccatcacggaaactgatctggacgacgcggctatgtgggtt
acagttcgcttatcatccagaaaaacgcgagacttcttcagtccagatggtccatacaat
aaatatcgtgaacctcttgtcatggcggtctcctacgcgttaaggtacctgttgattcag
gagtttgaggtaccttatatatggacgcacaaacgagattacataacgtatttcaatcct
caagaaatgcgaactcaagtggagctcatcagcctttccgaactttggcgcatttacaca
ttaggacaaaaatatcgatcgctggtggaaagacgaaatgcgcttgcatctctgtacgct
cgtctcggtgtagaggatcagtacttcactgagcacatacgagcgaaaattgatagtgtc
gaagtggtagcagatgcaaccgagtggcttgcgatgaagtacaaagctaaaaagcaggat
acatatgatttccactttcatgatgacgatgagcatcatgagacgaagaaacgtaaaatt
cctagtcgcacatctgcttatgaggtggcaaaaaagagtgtcgtatcaaagttggctgat
ggctttggtattcggcctcacgaaatagcacagaattttatgaatggtgatcacgcgcat
tttgtggatgatcaagaactcaaccccgttgcttacgcggagcagttcatggacccagaa
gtcaccaacgatcagcctcctgaagaacttcttcgccgagcccgtatgattctcgccact
gaagtgggcaaagatcctctgctcagacaagaaatgcggatgatgttcaaaaatgatgct
cagatatctgtcttaccaaccgaaaggggagtgaacaaaattgatgaacatcatccatac
tttaatttcaaatatctctaccataaaaacatcaatcagatgctggacacatctcagttc
ctacatataattgcagccgaagcagatcatttagttactgtttctatcttcctccccagt
gaagctaaagcacaatttgaacgcagactcaacgatgcatttgcttctgatagttatagt
gacacagcaaagtcatggaatgaggaacgcgctcgagtagtacaagagactatggagaat
catcttattcctgtcggcgtcaaatgggctcgggaatgggtgagagaggaagtggaagat
gcccttgcgaatcgatgcggtggcatccttaaagatcgcattgatgtagctccattcatc
acggcagacatgagacctggtgatactgcatctgtccttgcaatgtcatggggaaagggt
gatccgcagaaagatgccataacggttgtctttttggatgaagcaggtcggcttcgagag
catactaaaatcgataacttggtcgatacggagacccgcgacgaattcgtcgatttatta
cgaaggcgtcgacctgatgtcatcgcaattagtggtttcagtatggccacgaccaagtta
gctcagcgcgtcaaagacatcgtccgagggaagccacaggacgaaacggctgcaccagac
ggatggggcgccgatcccaaggattcgaatgagcaagccttcaacattcctgtgatctat
gtttctgatgaggtggcacgcatatatcaacatagcaagcgagctggggaggagtacagt
gcattgtctcctatagccaagtattgtgtgggactagctcgatacacccaaagcccaatg
aacgaatacgctgccctcggcgccgatatcagtgctattatgtttgaggatgaggatcaa
catctgatccctaaagagaagttgttatttgcgctcgagcgtgctctcgttgatgttacc
aacaaagttggggttgatatcaatcgtgccgtcaatgactcgtactaccagagcctgctt
cctttcgtgtgcgggcttgggccaaggaaatcgcagtccttggtgcagaaaattgctgga
atcggaggacatctcgtaaatcgagaccaattcatcaaggcaggcttgttgaccaccaat
attttcctgaatgcttctggtttcttgcatatatcccatgatgctgaactgaagcccacg
aaaaatcgccacattgatgatgacgttcaggatcccctggattctacccgcatacatcca
gaagactacgagttagcccgcaagatggctacagatgcccttgaactagatgaggaagat
attcacgatgagcacccatcacatgtcgtctctcttatcatgcaggacgacgacaacgaa
aagaagctcaacgagctcaatctcgtcgagttcgccgtcaatatgtttgaagccaatgaa
gatcgcaaaagacatactttgaatgacattcgcgaagaacttctcaagccactatcagag
caacgtaaaccattcccaactcttcaaccttgggatatattgaccatgcttagtggcgag
actcgccgcacattacgcatgggccttattgtttcagtcctcgtcttacgagtagtcaag
caagattttgtggtcgttcgtcttgattcaggagtagagggggtcatcaacgttgggtat
atgagtgatgaagggaatatagcccccgcgagtattgtcaataagggtcaaactattcaa
ggtgtcgtcgttgaagtcaaactggacctgacccaagatcaattcctcgtcgagttgtca
gctcggcctaatgatctggcagctggtgacggtcttttccgaaaggtcaaacatgatgag
atgtggaatgttcagcagcacgagcgggattcagaaatgcaggcacggaaaaaacgagcg
aaggtagatcaaacaaggcgggtcatcaaacatcccaatttccataatttcaatgccaat
caagccgagaactacctggacaagcaacaaaggggtgacgtagtcatcagaccatcttcc
aaaggtgccgatcatcttgctgtgacatggaaagtggacgaaaagctttaccagcatatt
gacgtgacagaaatcaacatagaccccaccggacaaggcgttggtggcctgcttgttgtt
gatgaaaagcatcaatatgctgatctcgacgagcttatcgtcaatcatgtacaagcaaca
gcgcgccgcgtagaagaactcatggctcatgaaaaattcaagcatgggtctgaagacgaa
ctacattcattcttgaagaattttgttatggctaatcccgccaaaagtatatatggtttt
accctaaaccgcaggaagcctggccatttcagcttatgtttcctagccaacaaaggttct
actgttcagacatggcccgttcgtgttgccccggaagcatattatctttttgaggcgact
gctgctggagttcctgagctatgcgatgctttcaaagtgaggtaa
DBGET
integrated database retrieval system