Serpula lacrymans: SERLADRAFT_390288
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Entry
SERLADRAFT_390288 CDS
T03135
Name
(RefSeq) hypothetical protein
KO
K14962
COMPASS component SWD2
Organism
sla
Serpula lacrymans
Pathway
sla03015
mRNA surveillance pathway
Brite
KEGG Orthology (KO) [BR:
sla00001
]
09120 Genetic Information Processing
09122 Translation
03015 mRNA surveillance pathway
SERLADRAFT_390288
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
sla03019
]
SERLADRAFT_390288
03036 Chromosome and associated proteins [BR:
sla03036
]
SERLADRAFT_390288
Messenger RNA biogenesis [BR:
sla03019
]
Eukaryotic type
mRNA processing factors
3' end processing
Cleavage and polyadenylation specificity factor (CPSF) complex
SERLADRAFT_390288
Chromosome and associated proteins [BR:
sla03036
]
Eukaryotic type
Histone modification proteins
HMT complexes
COMPASS/SET1 complex
SERLADRAFT_390288
COMPASS/SET1 complex (yeast)
SERLADRAFT_390288
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
WD40
WD40_Prp19
Beta-prop_EML_2
WD40_CDC20-Fz
WD40_WDHD1_1st
Beta-prop_CAF1B_HIR1
ANAPC4_WD40
WD40_MABP1-WDR62_1st
B-prop_COPA_B_2nd
Beta-prop_WDR35_TULP_N
Motif
Other DBs
NCBI-GeneID:
18811426
NCBI-ProteinID:
XP_007318687
JGI:
390288
UniProt:
F8NXJ6
LinkDB
All DBs
Position
Unknown
AA seq
246 aa
AA seq
DB search
MSGSLDKTVRLWDLRTPHCRGLLNLPSAPIVAYDTTGVVFAVAVNHYSRILLYDQANFDK
APFLTITLEDPTLALVSYPPRPIYMTSLSFSSNGKYILVGCSGDAHYILDAFEGHLLAKL
EGHMGLERRRLDAPVSIDPVKGNSGEEVSWTPDSKYVVGGSLNGRIIVWDVQHLPARTGT
PDLKTPPTRIQPLVNLEGHPGPSRCVRFNPRFAMMVTAGAELAFWLPDQTADNEEIAKEL
LKKKSS
NT seq
741 nt
NT seq
+upstream
nt +downstream
nt
atgtccggctcacttgacaagaccgtccgtctctgggatctccgcacccctcactgccga
ggcctcctcaacctgccttcagctcccatcgttgcctacgacacaacaggtgtcgtattt
gccgtagccgtcaaccattactcgcgcattctactctacgaccaggcaaatttcgacaaa
gcccctttcctcactatcacactcgaagatcccaccctggccctagtaagctatccccca
cggccgatctacatgacctcgctatccttctcttcaaacgggaaatacatccttgtcggc
tgttctggcgatgcgcactatatcctcgacgctttcgaaggtcatttactggcaaagctc
gagggacatatgggattagaacgacggaggctcgacgcaccggtaagcatcgacccggtc
aaagggaacagcggggaggaggtttcgtggacgcctgactctaaatatgtggttggaggg
agtttgaacggtcgaatcatcgtgtgggacgtgcagcacttgccagctcggacaggcacc
ccagatttaaaaacacctccaacgcgtatccaacctctggtaaatttagaaggccatcca
ggaccgtctagatgtgtaaggtttaacccgagatttgccatgatggtcaccgctggagct
gagcttgcattttggctacccgaccaaacagcggacaacgaggaaatcgcaaaggagctg
ctgaaaaagaagtccagttga
DBGET
integrated database retrieval system