Serpula lacrymans: SERLADRAFT_413049
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Entry
SERLADRAFT_413049 CDS
T03135
Name
(RefSeq) ATP-dependent RNA helicase
KO
K14805
ATP-dependent RNA helicase DDX24/MAK5 [EC:
5.6.2.7
]
Organism
sla
Serpula lacrymans
Brite
KEGG Orthology (KO) [BR:
sla00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03009 Ribosome biogenesis [BR:
sla03009
]
SERLADRAFT_413049
Enzymes [BR:
sla01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.7 DEAD-box RNA helicase
SERLADRAFT_413049
Ribosome biogenesis [BR:
sla03009
]
Eukaryotic type
Pre-60S particles
Helicases
SERLADRAFT_413049
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
DEAD
Helicase_C
ResIII
Motif
Other DBs
NCBI-GeneID:
18813117
NCBI-ProteinID:
XP_007313887
JGI:
413049
UniProt:
F8NH03
LinkDB
All DBs
Position
Unknown
AA seq
754 aa
AA seq
DB search
MAVGDGTTKNGLKRKARSKPSSSTKRLKTQTSSLSGLPWKSVARPTMSGYDGDDGILELE
EVDDVEVLYEETEAGKVLKFNILEKTDKKGKHDDIENSPDTPEDIEAGIESTTDVPLSSI
SFDSKLLLPNWHSYSLHPHLLQILHHQGFTTPTPIQSKSLPKAMEGRDIVGVAETGSGKT
LAYGLPILHHLLSRSRHPSSKVKRQVQALVLAPTRELALQVSDHLNMFARSIEAPIKEET
LDVELSETQQLKDKSKGKNVVSGTAKTFSKPPLVSIAAIVGGMSAQKQRRIIDRGVDILI
ATPGRLWDILEEDDSLAKQLASLRYLILDEADRMVENGHFAELDNILRLTLRLSREDVIE
PEFETQDTEVQAHAETEDALQTFVFSATLSKDLQRDLKKGYRPRIGKKGRSKPASTLEDL
VLRLDFRDANPEVIDISPEGGVVSGLQESKIECLSADKDIYLYYFLLRYPGRSLVFLSSI
DGIRRLTPLMDLLNVKVFPLHSQLEQRQRLKNLDRFKSTPNSVLLATDIAARGLDIPAVD
HVIHYQIPRSADTFIHRNGRTARAMRKGFSLLMCAPDERRVVKALLLSLGRDDADIPEIS
VELNLLDKLKARVQLARQIDTAQHKIKKANHERTWMKEAAEAMEIELDSDFMSGSDDEGK
PSKQQTKMKNAKTAALKAELREMLSQPLVARGISTRYITSGSRPIVDDIIAGEYHDMMLG
LKKTEAGNDLLTAKKGKQNKKEKAEPEEWNGFGS
NT seq
2265 nt
NT seq
+upstream
nt +downstream
nt
atggccgttggtgacggtacaacaaaaaacggcttaaaacgcaaggcccgttctaagcct
tcctcatccacaaaaaggctaaaaacccaaacctcctctctcagtggtctaccatggaag
tccgttgcaaggcctacaatgagcggatatgatggagacgatggaattctggagttagag
gaggtcgatgatgtagaggtgttatatgaagagactgaagcaggcaaagttctaaaattc
aatatccttgaaaaaacggacaaaaaagggaagcacgacgacatcgaaaattccccagat
actccagaagacatagaagcaggaattgaatcgactactgatgtgcctctgtcgtccata
tcatttgactccaaacttcttttgcctaattggcattcctattccttacacccgcacttg
ctgcaaatactgcatcatcaaggatttacgactccaacacccattcaatcaaaatctcta
ccaaaggcgatggagggacgagacatagtgggagtagctgagacggggtctggaaaaacg
cttgcatatggtcttcccatcctacatcatcttctttcgcgctcgcgccatccttcttcc
aaagtcaagcgacaggtgcaagcgcttgtactggcccccacacgtgaactcgccctacaa
gtatcagatcatctgaatatgtttgccagatcaattgaggctcctatcaaggaggaaact
ttggacgtcgaactgagtgaaacccaacagctcaaggataaatccaaaggtaaaaatgtc
gtctctggcacagcaaaaacattcagcaagcctcctctcgttagcattgctgccattgtt
ggaggaatgtcagcgcaaaagcaacgacgtataatcgaccgaggtgtcgatattctgata
gctacaccaggtcgattatgggatatattggaggaggatgattctctggccaaacagctc
gcttccttaaggtacttgatattagatgaagccgatcgaatggtagaaaacggccacttt
gcagaattggacaacatcttacgacttactctaaggctatctcgggaagatgtgattgaa
cctgagttcgaaacccaagacaccgaggtccaggctcacgcagaaacagaggatgcattg
caaaccttcgtgttttctgctaccttgagtaaagatctacagcgcgatctcaaaaaggga
tatcggccaaggattggcaagaaaggcagatcaaaacctgcttcgactctcgaggatctg
gtactccgacttgacttccgtgatgcgaacccggaagtgatagatattagtccagaaggc
ggtgtagtttcgggtctacaggagagtaaaattgaatgtttatctgctgataaggatatc
tacctttactacttcctcttacgttatcctggccgttcccttgtgtttctctcatcgatc
gacggtataagaaggctaacgccccttatggatctactaaatgtcaaagtcttcccacta
cactctcagttggagcagagacagcgtttaaagaatcttgaccgattcaaatcgactccg
aactcggttctcctcgcaaccgacattgcggcgcgtggacttgatatacctgcagtcgat
cacgttatacattaccagattcctcgctccgccgacacattcattcatcgaaatggacga
actgcgcgagcgatgaggaagggcttcagtttactcatgtgcgcgccagacgaaagaaga
gtggtgaaggccttgctattgagccttggtcgtgatgatgccgatatcccggaaatttct
gtcgaactgaatctgctggacaaattgaaggctcgtgttcaacttgcccggcaaatagac
acggcacaacataagattaagaaggcgaatcacgaacggacgtggatgaaggaggcagcc
gaggcaatggagatagaactcgactcagacttcatgagcggttctgacgacgagggcaag
cccagcaaacagcagacgaagatgaagaatgcgaagaccgctgcgctcaaggcggagtta
cgagaaatgctatcgcagccattggttgcgcggggtatctcgacgagatatatcacatcg
gggagccggccaatagtcgatgatatcattgctggagagtaccacgacatgatgctggga
ctgaagaaaacggaggctgggaatgacttgctcactgccaagaaagggaagcagaacaaa
aaggagaaagccgaaccagaagagtggaacgggtttggttcttag
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