Serpula lacrymans: SERLADRAFT_434531
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Entry
SERLADRAFT_434531 CDS
T03135
Name
(RefSeq) hypothetical protein
KO
K14550
U3 small nucleolar RNA-associated protein 10
Organism
sla
Serpula lacrymans
Pathway
sla03008
Ribosome biogenesis in eukaryotes
Brite
KEGG Orthology (KO) [BR:
sla00001
]
09120 Genetic Information Processing
09122 Translation
03008 Ribosome biogenesis in eukaryotes
SERLADRAFT_434531
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03009 Ribosome biogenesis [BR:
sla03009
]
SERLADRAFT_434531
Ribosome biogenesis [BR:
sla03009
]
Eukaryotic type
90S particles
U3 small nucleolar RNA-associated proteins
SERLADRAFT_434531
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
BP28CT
U3snoRNP10
HEAT_HEATR1
Motif
Other DBs
NCBI-GeneID:
18814405
NCBI-ProteinID:
XP_007314809
JGI:
434531
UniProt:
F8NLQ8
LinkDB
All DBs
Position
Unknown
AA seq
2092 aa
AA seq
DB search
MSSSLAAQLAASASLNTSLLLDRTGKRKQTESYLFTGRDADTHDLDSLHALASNAFVQLN
SLSPAFSRVTKSGTDKTTVYTDFDQALFSDAARDLDRTMQTREANASLDRTLSTFFRLLG
PWLMEAPAGKIIEWLVRRFRINEFNIDDTLALFLPYYESVHFAKMLSILHIKPNSQFSFL
LPFKSSGIPLNRTALVTAMVDNADVGRFVAALLPNAMKGFASHRTLLAFNSATMHDFLAR
MPVLDEGSLAFVLPAFLTPLQSARGEPNAILGSYILLSTLSHKTPLTSAAMSAIIGAMAN
AAASKNAQNQSRQLTAHFVKSTVAICSPQEEVPAFNAGVEITCLKIPGLAEELCNALRYT
GVEKFVLPLLEVLKTRVDEPPVTNLFSTIINASAAPNVIVRRTSAMLVQLAIHTPEESMS
AVRGLLSLVHQRHFDVLRTVAEEVVLDDDEQESKKRVEQLLISFSVSHPWAQSTDVNEVV
VASTSSTKEVRVHAVGKLYGILQEAEDGKDRVLEPADLTSIHSALLARIYDTQAGVLQAL
YASPARFLSILSAPSSDPESDSPLRNPKALLTTVIDQITRTSPGRAVLHEHLAFLGGPFV
AAYPTFAKEIQEKAFFPYLLASKAKFRTALSVWEALKDCDTETRDEGWLRGCMDIWQELG
LMGKRDKGSKQQKAQGKDEEDAEKLCTANLRVAAKIAENILASDSPTALTSALSKLQDPL
SHGRALGYLVVRALLLCTGTEQQIAISDKVLRAMHLNNLDVLDVSCDKNGGLQKALDDQE
VGMKATIKPGGRITLQVLQTSILALLPAIKRPDTNGLDWTADIAPDTDKVDDTGMRYVYL
LRRLYTLAVASSNISSTHVSHSLLKALFLRLKDDSLAFLLGILISRSSVETADRVRIPAL
LHVLAFLRGHSATNAVDFQAVIPSLMYVLSDSHKDKRAKALVFECLKALGGEDAKKHVYG
FDTIYGAQSADLQYLDYKDLSIYLTALAQQQDQVIQDASYLKVFHQQHFSNANAKYKRRV
LCFLLSHVIACPSPAAKIALLRSIEDVADSSKSRLLFPHMKELAEKSDLLSESFGSTFND
YVTLLVAACLTVSAADLNDQKSDSAWPTFISSLRYHFQSNSPSSTRQLFSGALQNGLYNS
LSFERQTEICNVLLQAGSEGGEAYLHSKALLGIILQDSHMISHLLSHHQPNVLESDPRAT
KRAKLDDVGHTDAAVGNIPSLTLLAEVLGTKDLPGSLDLISSVLETMSKVAHQDSQGASD
TNYIVQMLMSAVENIANKIKEVPPRAIRLDILLELIRVSDNPQTFHQALLLMGSLARLTP
DSVLHNVMPIFTFMGSNIFHRDDSYSFKVVQKTIESIVPVMASSLKTKYSDGLDLYVGSR
DFLRIFTDACGHIPRHRRSNFFVHLVEVLGAHEFLAPVCMLLVDRTANRVSRQRPEEAQT
SMALPISVLHHFSKPVQLYVSVETLQESLRLMSHVVDKMDPSPAFLEYYRDEEQPTPSSS
ILKRRAQALITFVGCVMQPSSPTEEVETVKGASTTALMALFIRLVTMEDSKTPESSLGDI
YATTQQSMVKALNIMAVADFMVAVLTLLQSDEDRIQIGALELLTERLPRIQDKARRDSLE
TITLIIERIKHFITVQSGGALVVSALNALTALGKDMCPGEEAALAATLPSIIKIMRVRTA
ADTTLAVLPSLVLGLGPRIIPHFRDIVRECTLILQEGIKGQWKQSTTVDNALNTLQSLLS
SLPAFWSKSELTPIIDIHLSCYTSAATTCPTTTLIKAIAKRIPAKALLPTVHDSWWSIDQ
SKKTDVDSISGFFFILKRSLHAAPRAEVLAQLRPTFKVFLDALDLRTISSTEVKKEETQV
ISAFLELVVKLNDSAFKPLFRRLYDWAFASDIDSKTRKVTFCRVYIALLEYFKGLMNPYM
SLLLQPVCDMLKTSSDASIQDRVLLSCVLDMLIKSLDSDDGAFWRDDKLRQLVKPLVDQV
ATCIKSDVAEEKDLLVKVLSAVTGSVTDDALLKTINLDILMHTRSEDVRLRVYALSCVGT
LWQEHGGKLLGFVAETATFIGECAEDENDTVVKEAHKLKSAVENIAGNINGL
NT seq
6279 nt
NT seq
+upstream
nt +downstream
nt
atgtcatcctcattggcagctcaactagcagcctctgcttccctcaatacatctttactt
ctcgatcgaactggaaaaagaaagcaaacagagtcctatcttttcacaggacgcgatgcg
gatactcatgatctggattctctgcatgcattagcttcaaatgctttcgtgcaactcaac
agtctttcacctgcgttctctcgtgtcacaaagtctggcaccgataaaactacagtctac
acggacttcgaccaagccttgttttcggatgctgctcgcgacttggatcgtactatgcaa
acacgagaggcaaatgcctcgttagatcggacgctcagcaccttttttagactgttgggc
ccatggttgatggaagctccggctggaaaaatcatagagtggctggttaggcggtttaga
ataaacgaattcaatatcgacgacacccttgccttgttcctaccctattacgagtccgtc
cactttgcgaagatgctgtcaatactgcacatcaaacccaactcacagttttcttttctg
ctgccgttcaagtcgtctgggatacctctcaatcgcactgccctcgtaactgccatggtc
gataatgcagacgtgggacgtttcgtcgctgctctgttgccaaatgccatgaaaggcttc
gcgtcacatcgcacccttctggcattcaactctgcaacaatgcacgattttctggcgcgg
atgcctgtacttgacgaaggctcgttggcttttgtgcttcctgcattcctcacgcctctg
caatctgcgcgcggtgaacccaatgcaatccttgggagttacatccttctatctacacta
tcacacaaaactccacttacatctgctgctatgtccgccatcattggcgctatggcaaat
gcagcagcatcaaagaatgctcaaaaccaaagtcggcagctcaccgcacattttgttaaa
tcaacggttgcgatatgctcaccacaagaagaggtgccggctttcaatgccggcgttgaa
attacatgtctgaagatacctggtttagctgaggagttatgtaatgccctcagatatacc
ggtgtggagaaattcgtcctcccgttattggaggtattgaagactcgcgtggacgaacct
ccagtgaccaacttattttccaccattatcaatgcatcggccgcccctaatgttatcgtc
cgacgaacgtcagccatgcttgttcaactggctattcacaccccagaggagagcatgtct
gctgtgcggggactcctttctctcgtccatcagcgtcactttgatgtactccgcactgtc
gctgaggaggttgtcctggacgatgatgaacaggagagtaaaaagagagtggaacagctg
ctgatctcattctctgtctcccatccttgggcccagagcacggacgtgaatgaggtggtt
gtcgcctctactagctcgacgaaagaagtccgcgttcatgccgtgggcaagctctatggc
atcttgcaagaagcagaggatgggaaggatagggtcctcgagcctgcagatttaacgtcg
attcattctgccctccttgcccgtatatatgatactcaagcaggtgtcctacaagcactg
tacgcctcccctgcgcggttcctttccattctatctgctccctctagtgatcccgagtcg
gattcaccgttacggaatccgaaggccctactgaccacagtcatcgatcaaattactcga
acttctcctgggcgtgctgtcctgcatgaacatcttgcgttcttgggcggccctttcgtg
gctgcttatcctacgtttgccaaagaaatccaagagaaagcattcttcccctatctgcta
gcttcaaaggccaagttccgcactgcgctgagtgtttgggaggctctgaaagactgtgat
acagagacgagggatgaaggatggcttcgagggtgcatggacatctggcaagagttaggc
ttgatgggcaagcgtgacaaggggagcaaacaacaaaaagctcaaggcaaagacgaggaa
gacgccgagaaactgtgtactgccaatttgagagtagcggctaagatcgcagaaaacatc
cttgcctcggatagtcctacggccctgacgtctgcactttccaaactgcaagatccactt
tcacacggacgtgctcttggttatcttgtagtgcgcgctctgctattgtgcaccggcaca
gaacaacagatcgcaatttctgacaaggtcttgcgagcgatgcatcttaataatctcgat
gttctggacgtttcgtgcgacaagaacggaggattgcaaaaagctcttgacgatcaggag
gttggtatgaaggctacaattaagcctggtgggagaattactcttcaggtcctgcaaaca
tcaatcctagctctgcttccggctattaaacgtcctgacactaatggcttggattggaca
gcagatatcgcacctgacactgataaagtggacgatacaggaatgcgttatgtatatctt
ttacgccgactatacacccttgctgttgcctctagcaatatctcatctacccatgtttct
cactcactcctgaaagcactatttctccgccttaaagacgattctctagcgttccttcta
ggaattcttatttcacgttcttccgtagaaacagcagatcgtgtccgcatccctgctctc
ttgcatgttcttgcattcctacgaggacacagtgcgacaaacgctgtagacttccaggca
gtgattccttcactcatgtacgtcttatcggattcacacaaggataagcgagcaaaagcg
cttgttttcgagtgtttgaaagctttaggaggcgaagatgcgaaaaaacatgtttatgga
tttgacactatctacggcgcgcagtctgccgatttgcaatatttggattacaaggacctg
tcgatctatcttactgccctagcgcaacagcaggatcaggtcatccaggacgcaagttat
ctcaaagtattccatcagcagcatttttcaaatgcaaatgcaaaatacaagcgccgtgtg
ctctgctttctcctttcgcacgttatcgcatgtccttctccagctgccaaaattgccctt
ctgcgatctattgaggatgtcgccgattcttccaaatcacgcttgttgttcccgcacatg
aaggaattggccgagaaatctgacctcctttcggaatcgtttggctcgactttcaatgat
tatgtcaccctccttgtagctgcatgcttaactgtatctgcagcagacttgaacgaccag
aaaagtgattctgcgtggcctacattcatctcgtcactgcgttaccatttccagtccaat
tctccatcaagcacgcggcagctcttcagcggcgccctccaaaacggcctatataattct
ttatcgttcgaacggcagacagaaatctgcaatgttttactacaagcaggaagcgagggt
ggtgaagcatatcttcattccaaggccctccttgggataattttacaggattctcacatg
atttctcacttattatcccaccatcaacccaatgtactcgaatcggatccccgcgcgacg
aagcgggcaaaactagatgacgttggccacacagatgctgcagtaggcaacatcccatcc
ttgacattattagcagaagttcttggcacaaaggaccttcctggctcgctcgatctaatt
tcttctgtgttggaaaccatgagtaaggttgcccaccaggattctcaaggagcttccgat
acaaactacattgtgcaaatgttgatgtcggctgttgaaaatatcgcaaacaaaatcaag
gaggtgcctccaagggctattcgattggacatactgctagaactcatcagagtctcagat
aatcctcaaacattccatcaagctcttcttttgatgggtagtctagctcgtctgacccca
gattccgttttacacaacgtcatgccgatattcacgttcatgggatctaacatcttccat
cgagatgactcgtatagctttaaagtcgtgcaaaagaccatcgagagcatagtaccagtt
atggcttcgtctctcaagaccaaatattccgatggcctcgatctgtacgttgggtcaaga
gatttcttgcggatcttcacagatgcctgtgggcacatacctcgtcaccgccgttcgaat
ttctttgtccaccttgtcgaagtccttggcgcacacgaatttttggccccagtttgtatg
ctactcgtagacaggacggcaaatcgggtcagccggcagcgacctgaggaggcccagacc
tcaatggctcttcctatctctgtccttcatcatttctctaagccagtacaactctacgtc
tcggttgaaactttacaagaaagtctgcgccttatgtcgcatgtcgtggacaaaatggat
ccctcgccagcctttttagaatattaccgtgatgaagagcagcccacaccgtcatcatcc
attctcaagcggcgagctcaagctcttattacatttgttggctgcgtcatgcaaccatca
tctcctacggaagaagttgagacagtcaagggtgcatcgactacagccttgatggctctt
ttcatcagattagtcaccatggaagacagcaagacgcctgaaagtagcctcggtgacatt
tatgctacgactcaacagtcaatggtcaaggctttgaatatcatggcggtcgctgatttc
atggttgccgtgcttaccctgttgcaatccgacgaggatagaattcagataggtgccctg
gaactattgacagaacgtctccctcggattcaagacaaggcccgtcgcgatagccttgaa
actatcactttgataatcgagaggatcaagcactttattaccgtccaatctgggggcgca
ctggttgtctccgcactgaacgcattgacagcgttaggtaaagacatgtgtcccggagag
gaggccgcgttagctgccacactcccctcaatcatcaagatcatgagagttcgcaccgca
gctgacactactctagctgtgctgccatccctcgtgcttggacttggacctcgtatcatt
cctcatttccgtgacattgtccgggagtgtacgcttatccttcaggagggtatcaaagga
caatggaagcaatcgacgactgtagacaatgcccttaataccctgcagagcctactttcc
tcactcccagctttttggagcaaaagtgaactcactccgataattgacatacatttgtca
tgctacacatcggccgctacaacttgtcctacgacgacattgatcaaagcaatcgcaaag
cgcattcctgcgaaagccttgttgccaacggtccacgattcatggtggagtatagatcag
tctaaaaagacggatgtcgacagtatttctggattctttttcatcctcaaacgttcattg
cacgcagctcctcgagccgaagtacttgcgcaattgcgcccaacatttaaagtcttcctc
gatgctctagacttgagaactatttcttccactgaagtcaagaaggaagaaactcaagtc
atttcggctttcttggagctggtagtcaagcttaacgacagtgccttcaaaccgctattc
cgtcgcctatacgactgggcctttgcaagtgacattgatagcaaaacacgaaaggtcacg
ttctgtcgtgtttacatagcactgctcgaatatttcaaaggtttaatgaatccttacatg
tcgcttttgttgcaacccgtttgcgatatgttgaaaacatcctccgacgcttctatccaa
gacagagtgttgttgagctgtgtcctcgatatgctgatcaagagtctcgacagtgatgat
ggcgcgttctggcgggacgacaagcttcgtcaacttgtcaaaccactcgtagaccaagtg
gccacatgcatcaaatcagacgtggcagaagagaaagatcttctggtcaaagttttgagc
gccgtcaccggttccgtcacagacgacgcactgctcaaaaccatcaaccttgacatattg
atgcacactcgatctgaagacgttcggttgcgcgtgtacgcgctatcatgcgtcgggaca
ctctggcaagaacatggtggcaagcttctaggtttcgtggccgaaacggcgactttcatc
ggtgaatgtgccgaagatgaaaacgacacggtagtcaaagaagcacacaaattgaagagt
gcagtggagaatatagcaggaaacataaatggtttatga
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