Serpula lacrymans: SERLADRAFT_441040
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Entry
SERLADRAFT_441040 CDS
T03135
Name
(RefSeq) hypothetical protein
KO
K11592
endoribonuclease Dicer [EC:3.1.26.-]
Organism
sla
Serpula lacrymans
Brite
KEGG Orthology (KO) [BR:
sla00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03036 Chromosome and associated proteins [BR:
sla03036
]
SERLADRAFT_441040
Chromosome and associated proteins [BR:
sla03036
]
Eukaryotic type
Gene silencing
RISC (RNA-induced silencing complex)
SERLADRAFT_441040
microRNA pathway
RISC loading complex
SERLADRAFT_441040
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
Ribonuclease_3
Ribonucleas_3_3
ResIII
DEAD
Dicer_dimer
Helicase_C
SWI2_SNF2
SNF2-rel_dom
Spermine_synt_N
Motif
Other DBs
NCBI-GeneID:
18815467
NCBI-ProteinID:
XP_007321595
JGI:
441040
UniProt:
F8P5C2
LinkDB
All DBs
Position
Unknown
AA seq
1460 aa
AA seq
DB search
MTVAQIPQVIVSESILPRRYQEEIFRRAQNSNVIAALDTGSGKTFISILLIKWIVLQEKA
KRKVIVFLVPKVALVKQQADSIAAHTPLRVKMFHGSLDLDLTDRANWKKSFEQSDLTVAA
AQIFLNILTHSHWSVEKVSLLIFDECHHTRKNHAYNGIMHEYFQTIPSDRPKVFGMTASP
IWNPKDAEGSLATLEKNLDATVIAVREHVEELQENSPRPVEVIKEFSPPSDTYDYLYPTL
WDCLSLFTNAVEINIPVDKLHMKYQMTRNSLGAFSADLFLYTDIKTRLIHFIDELESSQN
ETFLGLDGFDHHIDVDESSESAQSQFPAISPDLEQIDAILSEFRPFFDSGTEVPAVPIPV
PLAWCTPKVNALVEVLLEHYSPTFHAIVFVEQRQVAACLAKILPCIPELRGYVRCAELVG
HGANHGHGPVVNSNARGMGLARQQDTVELFRQGKLNLLVATSVAEEGLHFPACDIVVRFD
PIQHMVGYVQSRGRARTKTSTFVIMAQKDHSAHLVRYNAFLKSEPELKRVYQTREEPAAT
RLDPGEDSEEGEVEEDDPADVAVRERYIVPSTGAVLTYDSAVNLLNHLCSLIPHDAYTPP
QLPKYSGDYAVMLELPSSLPLPIDRLFFSGPERRSKREAKRAVAFLAVKELHRLDVFDDY
LLPATSSKGRGTEDADGRGILDFSDVPDLMDVLVRDPWTLGAKLYLHIVTIDDQDVGGLV
TGTCLPPVEFKSDGSTIQLRYDRVLLFDEDEEWDQRRMLSEFMRMGLWFCVTGRPAELPF
SSFLVPLLPNKHIDFEVVERVASEPYGSYDWSGASEKDYNHLMVMNSNQYGRALVLRNIR
YDLTPLSTTPPGSKESEYPTYRDYFVQRWTRKKREAFVPENSFLIEATYLPRCPSSVYRV
REHLIDLDLCKRQIARAGLLVPKDACRRVHFSEDVYRAFLLLPKLCRRVTDVYRARQERI
ELGLPMIAEDLLIEASTLPTTSLTFNNQRLETLGDSVLKLGSTVHIMNKYPHRHEGQLSH
LRQNSVSNRTLLSRAKEIELERFLNSESHNLHFWRYTVPEDTDSTLCRIRRSTRREFPRR
SLQDCMEATLGAAFVTGGIDMALQAGTALGLSFGGPIPWSLKYSRRPESSPAPHLFADLQ
ESLCYEFHRGDLLVEAATHPSFATSASSSYQRLEFLGDAVIDLVVLNYLYRRFPQANSGQ
LSAARSRAVCGPTLASISVRRLCLHKILLVNNVELSSAINRHVPILESTSVEDIINKGWK
YDPPKALSDVLESVVGAIFVDSAYNFEKVASVVELIMSDVLELLSPNLPKDPVSELMVWA
ASSGCRRISFRKTQSHAELRRNDSVSVVVHDVVVAGPITASNLSLSKGLAAERARILLDD
HSSDQCLTSLCDCSMAMKPQVPQVSLAIPDENDISKPVSDENEEGFATIAQRKLDETRTV
NPEECEGEVDAEIVVHEGPE
NT seq
4383 nt
NT seq
+upstream
nt +downstream
nt
atgaccgtcgcccaaatacctcaagtaatcgttagcgagtcgattcttccacgaagatac
caagaagaaatcttccgtcgagcacagaatagcaatgttatcgcagcattagatacgggc
agcgggaaaaccttcatcagcatcctgctcataaagtggatagtgctccaggagaaagca
aaacgaaaggtcatcgttttccttgtcccgaaggtagctctcgtcaagcaacaggcagat
tccattgctgctcacaccccattgcgcgtgaagatgtttcacggctcgttggaccttgat
cttaccgatcgggctaactggaagaaatcattcgagcaatctgatctgacggtcgctgca
gcgcagatattcttgaacatactcacacactctcactggagtgtcgagaaggtctctctc
ctgattttcgacgaatgtcaccataccaggaaaaaccatgcttataatgggattatgcac
gaatattttcagacaattccttcggacagacccaaagtctttggtatgacagcttcacct
atatggaatccaaaggatgcagaagggtctctcgcaacattagagaagaatcttgatgct
actgttatagctgttcgcgagcacgtagaagagctacaggaaaatagccctcgcccagtt
gaggtgattaaagaattttctccgccgagtgatacctatgactacctttaccctactcta
tgggattgtctttcacttttcacgaatgctgttgagatcaacataccagtcgacaaactt
catatgaagtatcaaatgactcggaatagtctcggggccttcagcgctgatttatttctc
tacacggacataaagacacgtttgatccattttatagacgaactagaatcctctcaaaac
gagacgtttcttggtttggatgggtttgatcaccacatagatgttgacgaatcatccgaa
tctgcacaatcacaatttcccgccatttctcccgatctcgagcagatcgatgccattctg
tctgagtttcgtcccttctttgacagcgggactgaagtacctgcagttcctattcctgtg
cctcttgcgtggtgtacgcccaaggtcaacgcccttgtcgaagttcttcttgaacactac
tcaccaacgttccatgcaatcgtgtttgtggagcaacgccaagtcgcggcatgcctcgcg
aagattcttccgtgtatacctgaactgcgcggttacgttcgatgtgcagagctcgtcggg
catggtgcaaatcatggacatggtcctgtggtgaattccaatgcaagaggtatgggccta
gcgagacagcaagatacggtcgagttatttcgtcaaggcaagctaaaccttcttgtggca
acctctgtcgctgaggagggcctccattttcctgcatgtgatattgtcgttcgctttgac
ccaattcagcacatggttggttatgtgcagtctcgaggacgtgcgcgcacaaagacttcc
acttttgtcatcatggcacaaaaggatcatagtgcgcatcttgttcggtataatgctttc
ttaaagagtgaacccgagctcaagcgcgtctatcaaactcgcgaggaacctgctgctact
cgactggatcctggagaagattcagaagaaggtgaagtcgaagaagacgatccagcagat
gtcgcagtgcgcgaacgatacattgtgccatccacaggagcagtactaacctacgactcc
gcggtaaatctgctgaaccatctttgctcgctcattccacatgatgcatacacaccaccg
cagttaccaaaatactcgggtgactacgctgtgatgctagagcttccatcaagtcttcct
ctgcctatcgatcgacttttcttttctggaccagaacgacggtcaaaacgtgaagccaag
cgtgctgttgcttttttggcagtgaaagagttacatagactagatgtgttcgatgattat
ctattacccgcgacaagttctaaaggacgtggcacggaagatgcagatggaagaggcatc
ttggatttcagcgacgtgcctgatctgatggatgtgctagttagggacccgtggacgtta
ggagcgaaactttacttgcatatagtcacaatcgacgatcaagatgtagggggactcgtc
acgggaacttgcttgccgccagtcgagttcaagagcgatggttctaccattcaattgcgc
tatgacagagttttgctattcgatgaggacgaggaatgggatcaacggcggatgcttagc
gaattcatgagaatgggattatggttctgtgttaccggaagaccggctgagctcccgttc
agttctttcctggtacccctccttcctaacaagcacatcgacttcgaggtcgtggaacgg
gtagcatcagaaccatacggttcatacgactggagtggtgcctctgagaaagattacaac
catcttatggtgatgaactcaaaccaatatggtcgtgccctcgtcttacgcaacatacgg
tatgatctcactccactttccactaccccaccgggctctaaagagtcagagtatcccacc
taccgagactactttgttcaaagatggacgaggaaaaaacgcgaagcatttgtcccggaa
aattctttcctcatcgaagccacctatcttccccgttgcccgtcgagcgtatatcgagtc
cgtgaacacctgatagatcttgacctatgcaaacgccagattgctcgcgctggcttgctc
gttcctaaagatgcatgtcgtcgcgttcatttctcagaagatgtctatcgtgcctttcta
ctgttgcctaagttgtgccgccgagttaccgatgtttatcgcgctcgacaagagcgaata
gagcttggccttcctatgatcgcggaagacttgcttatagaggcttcgacgctccctact
accagcctgacattcaataatcagaggctggaaacactcggagactctgtgctgaagctc
ggtagcaccgttcatatcatgaacaagtatcctcaccggcatgaaggtcaactatcccat
ctacgacagaatagtgtttcaaacagaacgttgttatctcgcgccaaggaaatagagctt
gagaggtttttgaattcagagtcacataatttacacttctggcgctatactgtgcctgag
gatacggattccacgctttgtcgtattaggaggagcactcgacgagagtttccacgaaga
agcttacaagactgcatggaagccacgcttggtgccgcattcgttactggagggattgat
atggctcttcaagccggcactgcgctaggtctgtcctttggaggcccaatcccatggtca
ttaaagtacagccgtcgaccagagtcgtctcctgcgccccatttgtttgctgacttgcaa
gaaagtctctgttatgagtttcatcgtggtgatctgttggtagaggcggccactcacccg
tcatttgctacatcagcaagctcctcatatcagcgtttagagtttcttggggatgctgtt
attgatctcgttgtcctgaattatctgtatcgccgctttccacaagccaattcgggacag
ctatcagcagcacggtctcgtgctgtctgtgggccaacgctggcgtcgatctcagttagg
cggttatgcctgcataaaatccttcttgtcaacaatgtggagctgagttccgccatcaat
agacatgttcctattctggaatcgacttccgtcgaagatatcataaacaaaggttggaag
tacgaccctccaaaggctttaagcgatgtgctagaaagtgtcgtcggtgctattttcgtt
gactcggcgtacaactttgagaaagtggcttctgtagtcgaactgatcatgagcgacgtt
ctggagctgctctctcccaaccttcctaaagatccagtctcggagttaatggtctgggca
gcttcttccgggtgccgcagaataagtttccggaaaacacaaagtcatgcagaacttcgg
agaaacgacagcgtctcggtggttgtgcatgatgttgttgttgctggccccatcaccgct
tccaacctctcattatctaaaggattggctgctgaacgggctcgtattttattggatgac
cactcttccgaccaatgtttgaccagtttgtgcgactgtagcatggctatgaaacctcaa
gtgccacaagtctccctggccatacctgacgaaaatgacatctcaaagcctgtttcagat
gaaaacgaagagggttttgcgactatcgcccaacgcaaattagatgagactcggaccgtt
aaccctgaagagtgcgaaggtgaggtggacgccgagatcgtcgtacatgaaggtccagaa
tag
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integrated database retrieval system
