Serpula lacrymans: SERLADRAFT_445537
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Entry
SERLADRAFT_445537 CDS
T03135
Name
(RefSeq) hypothetical protein
KO
K03177
tRNA pseudouridine55 synthase [EC:
5.4.99.25
]
Organism
sla
Serpula lacrymans
Brite
KEGG Orthology (KO) [BR:
sla00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03016 Transfer RNA biogenesis [BR:
sla03016
]
SERLADRAFT_445537
Enzymes [BR:
sla01000
]
5. Isomerases
5.4 Intramolecular transferases
5.4.99 Transferring other groups
5.4.99.25 tRNA pseudouridine55 synthase
SERLADRAFT_445537
Transfer RNA biogenesis [BR:
sla03016
]
Eukaryotic type
tRNA modification factors
Psudouridine synthases
SERLADRAFT_445537
Prokaryotic type
SERLADRAFT_445537
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
TruB_N
TruB_C_2
Motif
Other DBs
NCBI-GeneID:
18816208
NCBI-ProteinID:
XP_007313984
JGI:
445537
UniProt:
F8NI20
LinkDB
All DBs
Position
Unknown
AA seq
368 aa
AA seq
DB search
MPKISLPPLPLSGLFAIAKPSGPTSMSVINDVKQLVCNSRLFVEASKLEEKRRTPKRGRR
AREVVKIGQGGTLDPLADGVLVVGVGKGTKKLGDFLDCIKEYKTTVLLGCETDTYDSEGV
RVRVAPWRHVTKEAVEEQLVNFRGEIYQTPPIFSALKMDGKPLYEYARKGIPLPRPIEKR
KVTVHSLTLTDWKGPNHEFTWPEKQFTDKEREAMEKALRSVQEDVVIRNDPEPTSEPKDG
LEPERETTLGDGLDRASEEEQAQKQTQTPSAFVLTMRVSGGTYVRSIVHDLGHALGSAAH
VVTLTRSRQSRFALSPDEEADGAKGCIAWEVFTKAAEDEGAEDADGLKEWERAVLDKFEI
IDENGNKS
NT seq
1107 nt
NT seq
+upstream
nt +downstream
nt
atgcccaagatcagccttcctccattaccgttatctggtctcttcgcaatcgccaaacct
tcggggccaacatccatgtctgtgatcaacgatgtcaagcagcttgtatgtaactcgcgc
ctcttcgtcgaagcttccaagcttgaagagaagcgaaggacgccaaagagagggagaagg
gcacgggaagtggtcaaaatcggccagggagggacgctcgatccacttgcagacggtgtg
ctggtggtcggagtggggaaaggaactaaaaaactgggcgacttcttagattgtatcaag
gaatacaaaactacggtattgctaggttgcgaaacagacacatatgacagcgaaggcgtc
cgtgtccgcgtcgctccatggcgtcatgtcaccaaagaagcggtcgaggagcagctcgtc
aatttcagaggtgagatataccagacacctcctatcttctctgccctcaagatggatggt
aaacctctctacgaatacgcgcgaaagggaatcccactccctcgacccattgaaaagcga
aaagtgacggtacattcactcacactcacagactggaaaggacccaaccacgagttcact
tggcctgagaagcagttcacggacaaagaaagagaggcgatggagaaagccctgcggagt
gttcaggaggacgttgtcattcgaaatgatcccgagcccacatctgagcctaaagatgga
ctcgaaccagagcgtgagaccactctgggtgatgggctggatagagcaagtgaggaagag
caagctcagaaacagacgcagacgccttctgcttttgtccttaccatgcgtgtttcaggc
gggacatatgtccggtccatagttcacgatttggggcatgcacttggctcagctgctcac
gttgtcaccctcacccgatcgcgtcagagtcgatttgctctctcaccagacgaagaggcg
gacggtgcaaaaggctgcattgcgtgggaggtgttcacgaaagcggcggaggacgagggc
gccgaggatgcagatgggctaaaggagtgggagagggcagtgctcgataaatttgagatt
atagatgagaatggtaataaaagctaa
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