Serpula lacrymans: SERLADRAFT_445851
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Entry
SERLADRAFT_445851 CDS
T03135
Name
(RefSeq) hypothetical protein
KO
K14555
U3 small nucleolar RNA-associated protein 13
Organism
sla
Serpula lacrymans
Pathway
sla03008
Ribosome biogenesis in eukaryotes
Brite
KEGG Orthology (KO) [BR:
sla00001
]
09120 Genetic Information Processing
09122 Translation
03008 Ribosome biogenesis in eukaryotes
SERLADRAFT_445851
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03009 Ribosome biogenesis [BR:
sla03009
]
SERLADRAFT_445851
Ribosome biogenesis [BR:
sla03009
]
Eukaryotic type
90S particles
U3 small nucleolar RNA-associated proteins
SERLADRAFT_445851
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
Beta-prop_WDR3_1st
Beta-prop_WDR5
WD40
Beta-prop_THOC3
WD40_Prp19
Beta-prop_WDR3_2nd
WD40_CDC20-Fz
Utp13
WD40_WDHD1_1st
WDR55
EIF3I
Beta-prop_TEP1_2nd
Beta-prop_EML_2
WD40_Gbeta
Beta-prop_CAF1B_HIR1
WD40_MABP1-WDR62_2nd
Beta-prop_WDR36-Utp21_2nd
Beta-prop_WDR90_POC16_2nd
Beta-prop_WDR36-Utp21_1st
Beta-prop_SCAP
Beta-prop_TEP1_C
Beta-prop_EML
NBCH_WD40
Beta-prop_IFT122_1st
Beta-prop_WDR75_1st
Beta-prop_WDR41
Beta-prop_EIPR1
Beta-prop_SPT8
WDR90_beta-prop_4th
Beta-prop_DCAF4
ANAPC4_WD40
Beta-prop_RIG_2nd
WD40_like
Beta-prop_Vps41
Beta-prop_ACSF4
Beta-prop_Aladin
WD40_MABP1-WDR62_1st
Beta-prop_WDR35_TULP_N
Beta-prop_WDR19_1st
Beta-prop_IFT140_1st
Beta-prop_DCAF12
Mcl1_mid
WD40_CFAP43
VID27
Motif
Other DBs
NCBI-GeneID:
18816235
NCBI-ProteinID:
XP_007314578
JGI:
445851
UniProt:
F8NKB3
LinkDB
All DBs
Position
Unknown
AA seq
935 aa
AA seq
DB search
MASSPRQKLKTAYKKGRVISPLHTSGPVAITSDGFKLLTCVAEEVILTDIFSGSEVCRFS
GDTQSITSLCVTPSSTHVMVFTSTPSLRIFEIPFSVSTIGTVHPIRVIARPHDAPVHVCR
ADPTSIYFASGSADGVVKVWDILRGHVTHIFKGHGGVVSALVFNIPRNPSLVTSVRTMQL
ITASVDTRIRMFDLTATVNKSPSSIRPFAILEGHLSVPRGLDVTEDGKWLISGGRDAVVL
IWDLVNEQATSKGKHGLKGKGKEMLSVPVLINTIAVLDCVEAVGLLDLGEYVGHDPNTSQ
LRLYTAGEKGVVSVWDGKNGNLLFSLDKGDRQTEDQEEQRQIVDAFYVPATSTIVSVHAD
QNILFHSLISRRLVRQFVGFNDEIVDAAFLTPTPSVESTPVDTHIAFATNSSLIRVYSTS
GLDARLISGHSESVLCLDRGAGGRVLVSGSKDRSARIWAVPWSGQENPSDKDGQWRCLAL
CEGHTESVGAVAMSRSEGGESTLRFMFTGSQDRTIKMWDLSVVSITHDINSAADDMIKCM
SLATYKAHEKDINSLDVSPNDKLLASGSQDRTAKLYEVEYLSNGKTSPRGEIKLLGTFKG
HKRGVWNVRFGKTERVLATGSGDKTVKLWDLENFSCLKTFEGHTNSVLRVDFINAGMQLV
STASDGLVKLWNIRDEQDVATMDNHEDKVWALAISADERIIVSGAADSVVTFWEDCTETQ
ELEKEAERTELVLKEQNFMNYLAVRDYRRAIQLALAMEQPGRLLVLFRVIQSSSQTQEVN
QSVTGHPTVDEIIRTISDSELARLIRHVRTWNANAKTSVVAQEVLNAILKLRSVGDFIHA
LANETGEKAFMKFDRGTDRHDGLPTGTGTTALKDMVDILIPYTERHLSRMDRLIQESFVL
DYLVGEMDGGLFDEQTIGGDITMDIKKAVELEHSL
NT seq
2808 nt
NT seq
+upstream
nt +downstream
nt
atggcatctagtccccgccaaaagctgaaaactgcgtataaaaaaggtcgcgttatttct
cctttgcacacttctggtcctgtcgcaatcacctcagatggatttaagctacttacatgt
gtcgcagaagaggttattttgacagatatattttccggaagcgaagtttgtcgtttctca
ggagacacacaatcgatcacctcgctatgtgtaacaccatcatctacacatgttatggta
ttcacatccacaccatcacttcgcatctttgaaataccattttctgtctctactattgga
actgtacatcccatacgagtcatagctcgtcctcatgatgctcctgttcatgtgtgcagg
gctgatcctacctcgatttatttcgcttcaggttccgcggatggtgttgtgaaggtgtgg
gatatacttcgtggtcatgttacacacattttcaaaggacacggtggtgtagtaagcgcc
ctggttttcaatatccctcgaaacccatcgctggtcactagtgtcagaaccatgcagctt
ataactgcttccgtagacacccggattcgtatgtttgacttgaccgcgacggttaataaa
tctccaagcagtatacgtcccttcgcgattctggagggccatttatccgtcccgcgaggt
cttgacgtgaccgaagatggcaaatggcttattagcggaggaagagatgcagttgtctta
atttgggatctagtaaatgagcaagcaacttcgaagggaaaacacggcttgaaagggaaa
ggaaaagaaatgttgtctgttcctgttcttatcaacacaatcgctgttttggactgcgta
gaggcagtgggactacttgatctcggtgagtatgtggggcacgacccaaatacgagtcaa
ctacgactgtatacggcgggagagaaaggagttgttagtgtctgggacggaaaaaacgga
aacctacttttttctctcgataaaggagaccgccaaacggaagaccaagaggagcaaagg
caaatagttgacgcattctacgtgcctgcaacatcaaccattgtttctgttcacgcagat
caaaatatacttttccattcgctaatatctcgtcgtcttgtccgtcaattcgtaggcttc
aatgacgagattgttgatgctgccttccttactccaacaccttcagtggaatccacaccg
gtagacactcatatcgcctttgccacaaattcatcccttattcgtgtttactcgacctct
ggattagacgcccgtttgatttcagggcactcagagagtgtactgtgtcttgatcggggt
gctggagggcgtgttcttgtcagtggaagtaaagaccgctcagcaagaatatgggcggtc
ccatggtccggtcaagaaaatccaagcgacaaggacggccaatggaggtgcttagcgctt
tgcgagggccataccgaaagtgtaggagctgttgccatgtcgcggagcgaaggcggggag
tctaccctgcggtttatgtttacagggagccaggatcgcacaatcaagatgtgggatcta
tcagttgtgtctattacacatgacataaattctgccgcagatgacatgataaaatgtatg
agtcttgcgacatacaaggcccacgagaaagacatcaattcactggacgtctctccaaat
gacaaattacttgcctctggatcccaggatcgcactgctaagctttacgaggtagagtat
ttgagcaatggaaaaacttctccgcgtggggaaattaaacttcttggtacattcaagggt
cacaagcgaggtgtatggaatgtgaggtttgggaagacggagcgggttttggcaactgga
agtggggataagactgtgaagttatgggatttggagaacttttcgtgtcttaaaactttc
gagggtcacacgaactcagttcttcgagtggatttcatcaatgcgggaatgcaactggtg
agcactgcatcagatggactggttaaattgtggaacattcgggatgaacaagatgtcgca
actatggataatcacgaagataaggtttgggcattggctattagtgctgatgaacgaata
attgtttctggtgctgcggactcggttgtcacgttctgggaggactgcacagagacacaa
gaactagaaaaagaagcagaacgaacagaactggtattgaaagaacaaaacttcatgaat
tatctggctgttcgtgattaccgcagggctatccaactggctcttgcgatggagcagcca
gggaggcttcttgttctatttagagtaatacaatcttcttcacagacccaagaagtaaac
cagtcggtgacaggccatccaacggtagacgaaattattcgaactatatctgactccgaa
cttgcgcggttaattcgacatgttcgtacttggaacgcgaacgccaagacgagtgtagtg
gcgcaggaagtcctgaatgcaattttgaagctgcgttcggtgggcgatttcatccatgcg
cttgctaacgaaactggcgaaaaggcattcatgaagttcgaccgagggactgatcgtcac
gatggtttaccaacgggaacaggcacgactgctttgaaagacatggttgatatattgatt
ccgtacactgaacgtcatctgtctagaatggatcgtctaatacaggagagtttcgtgctg
gattatttagtgggtgagatggatggggggctatttgacgaacaaaccataggtggagat
atcacgatggatattaagaaggctgtggagttggagcactccttgtag
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integrated database retrieval system