Serpula lacrymans: SERLADRAFT_447029
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Entry
SERLADRAFT_447029 CDS
T03135
Name
(RefSeq) hypothetical protein
KO
K14400
pre-mRNA cleavage complex 2 protein Pcf11
Organism
sla
Serpula lacrymans
Pathway
sla03015
mRNA surveillance pathway
Brite
KEGG Orthology (KO) [BR:
sla00001
]
09120 Genetic Information Processing
09122 Translation
03015 mRNA surveillance pathway
SERLADRAFT_447029
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
sla03021
]
SERLADRAFT_447029
03019 Messenger RNA biogenesis [BR:
sla03019
]
SERLADRAFT_447029
Transcription machinery [BR:
sla03021
]
Eukaryotic type
RNA polymerase II system
Other transcription-related factors
Transcription termination factor
SERLADRAFT_447029
Messenger RNA biogenesis [BR:
sla03019
]
Eukaryotic type
mRNA processing factors
3' end processing
Pre-mRNA cleavage factor IIm (CFIIm)
SERLADRAFT_447029
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
Pcf11_C
CID
zf_PCFS4
Motif
Other DBs
NCBI-GeneID:
18816338
NCBI-ProteinID:
XP_007315902
JGI:
447029
UniProt:
F8NM23
LinkDB
All DBs
Position
Unknown
AA seq
664 aa
AA seq
DB search
MSLYSQNHAYGQVAYPALGYPQPGLSAYPYQQPPAPAPPAPVYYVDPNSFRRDYTARLAE
LTINSRPIIQNLSMVAQEYSRWAEVVAQCLENHIRRVPPWMKLPAFYLLDAISKNVYEPY
GRHFAAYVIPLFLESYEQVDQNTRSKMEEMLLTWRTGAPNGKELFGFVPQLALERGVWGE
SSATDSSSSTLSGSGQISKAQVLSELEYTLGQKERALHSNPYDTAAAKHVDVLLQLRKLV
EAGVSQKELRQILGQLRAMGRTSGPPSQPPSTVAPYPSSSYTQSYPVPVSQPSYSHSMQP
SFSPSAPSAYSYNSQNQPKIEQTTLSSLLQPPEAPSSSSNNITGVPPTNIANLFSALLKA
GVVSASGTPTGAGATAKPEGSSVAPMDMGREASREYRKSILKHSIKLTTSDITKMRSPIV
HFLFDRLPVQCKQCGIRYADNATGRKDMEDHLDMHFRQNRKANQNIGRGHSRSWFVGIED
WIHDTSIDMKGKGRADGSRPLNVKAAAAAEAAKREAELREQFVVVPPGDEAKSISCPICK
ETLKSEFLEDDEDWVWKNAVKKDDRIFHATCHAEASTSVHSLAARLRNEVAGRSRSGTPE
GPSLRLTPPKGVSTLRISHSPSPDSKLAGTKRKAVNDDPNSDASLQYEHDATPPMKRLAL
SVLS
NT seq
1995 nt
NT seq
+upstream
nt +downstream
nt
atgtctctgtattctcagaaccacgcatatggtcaggtcgcatatcctgctctaggatat
ccccaacctggtttatcagcttacccgtaccaacaaccgcccgcaccagcaccgcctgcg
cctgtatattatgtggatcccaattctttccgtcgtgattatactgcacgtttggcggaa
cttacaattaattccaggccgattattcaaaacctatcaatggttgctcaagaatattca
agatgggccgaagttgttgcacaatgtttagagaatcatatacgtagggttccgccttgg
atgaaacttccagcgttttatttgttagacgcgatttcgaaaaacgtctatgaaccatat
gggcggcattttgctgcatatgtcattccattgtttttggagtcttatgaacaggttgat
cagaatactcgcagcaagatggaagagatgctcctcacgtggcgcactggcgctccaaat
ggtaaagaattattcggcttcgttcctcagcttgctctcgaaagaggtgtctggggcgag
tcaagtgcgacagattcatcaagtagtactttgagcggctcaggtcagatttcgaaagct
caagtacttagcgagttagaatatacccttggccagaaagagcgagccctccattcaaat
ccgtacgatacagcagcagcgaagcatgtggatgtactactgcagctaagaaagcttgtc
gaagctggcgtatcacaaaaggaattacgccaaatactcggtcaattaagagctatgggc
cgaacttctggtcctccgtcccaacctccatcaaccgttgcaccatatccctcttcgtca
tatacacagtcctacccagtcccagtgtctcaaccttcttattcacatagcatgcaacct
agcttttctccgtctgctccgtctgcatactcctataactcgcagaatcaaccaaagata
gaacaaaccaccctttcttctcttctgcaacctccagaggcaccttcatcgtcatcgaat
aacataaccggtgtacctcccaccaatatagcaaatttgtttagcgccttgttgaaagca
ggtgtcgtatccgcttccggcacccccactggcgcgggtgccactgcgaagcctgaaggc
agttctgttgcgccgatggatatggggcgtgaagcatcgagggaatatcgcaagtctatt
cttaaacattcgataaaacttaccacatcggacataactaagatgcgcagtccaatagta
cacttcctatttgatcgtctgcctgtgcagtgtaagcaatgtggtatccgttatgcggat
aatgctacgggcagaaaagatatggaagatcatttggatatgcatttcagacaaaaccgt
aaggctaatcagaatatcggacgtggtcatagcaggagttggtttgttgggattgaggac
tggatacatgatacatctatcgacatgaaaggaaaaggtcgtgctgatggatcacgacca
ctaaatgtcaaggctgcagctgctgcagaggcagcgaaacgagaagctgaattgcgagag
cagtttgtagtcgtgcctccgggcgatgaagcaaagtctatatcgtgcccgatatgtaag
gaaacccttaagtcggaattcctcgaggatgacgaagactgggtgtggaagaacgctgtt
aagaaggatgataggatctttcacgcgacttgtcacgctgaggcgtcgacgtccgtgcac
agcttggctgcgcggctgcggaacgaagtggcagggcgaagccgatctggaacgccggaa
ggcccgtcgctgcgcttgactcccccaaagggcgtatctacgctgcgcatatcacactca
ccttcgcctgattcaaagcttgctggaacgaaacgtaaggctgtcaatgatgatcctaat
tcggatgcatctttgcaatatgaacatgatgcaacaccgcccatgaagagattggcgctt
tcggtattatcatga
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integrated database retrieval system
