Serpula lacrymans: SERLADRAFT_449372
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Entry
SERLADRAFT_449372 CDS
T03135
Name
(RefSeq) hypothetical protein
KO
K12823
ATP-dependent RNA helicase DDX5/DBP2 [EC:
5.6.2.7
]
Organism
sla
Serpula lacrymans
Pathway
sla03040
Spliceosome
Brite
KEGG Orthology (KO) [BR:
sla00001
]
09120 Genetic Information Processing
09121 Transcription
03040 Spliceosome
SERLADRAFT_449372
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03041 Spliceosome [BR:
sla03041
]
SERLADRAFT_449372
03009 Ribosome biogenesis [BR:
sla03009
]
SERLADRAFT_449372
Enzymes [BR:
sla01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.7 DEAD-box RNA helicase
SERLADRAFT_449372
Spliceosome [BR:
sla03041
]
Complex A
U1 snRNP components
U1 related factors
SERLADRAFT_449372
Complex B
SERLADRAFT_449372
Ribosome biogenesis [BR:
sla03009
]
Eukaryotic type
Pre-60S particles
Helicases
SERLADRAFT_449372
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
DEAD
Helicase_C
ResIII
P-loop_SecA
Utp25_C
Phage_Mu_Gp48
Motif
Other DBs
NCBI-GeneID:
18816541
NCBI-ProteinID:
XP_007318616
JGI:
449372
UniProt:
F8NXC5
LinkDB
All DBs
Position
Unknown
AA seq
487 aa
AA seq
DB search
MHNLGGGLKTVDWTSQKLERFEKNFYVEDKRVSSRSERDIDEFRRSKEIKVQGRGVPRPV
SSFDEAGFPEYIMSSILAQGFSSPTPIQCQAWPMALSGRDVVAIAQTGSGKTISFALPAM
LHINAQPLLAPGDGPIALVLAPTRELAVQIQQECTKFGSSSRIRNTAIYGGAPKGPQIRD
LQRGVEVVIATPGRLIDMLETQKTNLRRITYLVMDEADRMLDMGFEPQIRKIVSQIRPDR
QTLMFSATWPKDVQKLANDFLKDMIQVNIGSMELTANHNIQQIVEVCSDFEKRAKLIKHL
DQISAENAKVLIFVGTKRVADDITKYLRQDGWPALAIHGDKEQRERDWVLGEFKAGRSPI
LIATDVASRGLDVKDVGYVINYDFPNNCEDYIHRIGRTGRAGMKGTSYTYFTTDNAKSAR
ELIGILREAKANVPPQLEEMAMFSGGGGRSRYGGGGGRGRGGGFGRYGGGGGGGGGGHDN
YGSRERW
NT seq
1464 nt
NT seq
+upstream
nt +downstream
nt
atgcacaatcttggtggaggtttgaagacggtcgattggacatcacaaaaactagaacgt
tttgagaaaaatttctatgtggaagacaaacgagtttcctctcgcagtgagagggatatt
gatgagtttaggcgtagtaaagaaatcaaggtacaaggacgaggggttcctagaccagta
tcgtcattcgatgaagctggattcccggaatatatcatgtcctcgattcttgcacaagga
ttttcttctccaactcccattcaatgtcaggcttggcctatggcattaagtggcagagac
gtcgttgcaattgcgcagactggaagtgggaaaacgatttcttttgctcttccggctatg
ctccatatcaatgcccaacctctgttggcgcctggagatggccctattgccctagtcttg
gctccgactcgtgaattggctgtacagattcagcaagagtgtaccaaatttggctctagc
tctcgcataagaaatacagcaatatatggcggtgctccgaaaggtccacagattcgtgat
ctgcaacgcggggtcgaagtggtcatagctacgccaggtcgcctgatcgatatgttggag
actcaaaaaaccaatttgcgccgtatcacttacctagtcatggacgaagccgatcgcatg
ctagacatggggtttgagccccaaattcgcaagattgtctctcagattcgccctgatcga
cagacacttatgtttagcgcaacgtggcctaaggacgtccaaaagcttgccaatgacttt
ttgaaagatatgatacaggttaatatcgggtcaatggaactcactgccaatcacaatatt
cagcaaattgttgaagtgtgcagcgattttgaaaagcgtgcgaagttgatcaagcatctg
gaccaaatcagcgccgagaacgcgaaagtactgatttttgttggcaccaaacgggtcgcg
gatgacattaccaagtatttaagacaagatggatggcctgcgctggcaattcatggcgat
aaagaacagcgggaacgtgattgggttcttggcgaatttaaggcaggtcgatcgcccatt
ctgattgccacggatgttgcatcccgtggtcttgatgtgaaggatgttggttatgtgatc
aactatgattttccaaacaattgcgaagactatatacaccggattggtcgcacaggtcgt
gctggcatgaaaggcacctcatatacttactttaccaccgataatgcaaaatcagcgcgc
gagctgattggtattttacgcgaggccaaagccaacgtcccaccccaacttgaagagatg
gctatgttcagtggcggtggcggacgaagtcgttatggaggtggaggtggtcgtggtcgt
ggcggagggtttggacgatacggtggtggcggtggtggtggtggcggcggccacgacaac
tacggcagtagagagaggtggtga
DBGET
integrated database retrieval system
